IL_9K0Z_032
3D structure
- PDB id
- 9K0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EF-G2 bound 70S ribosome complex of M. smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CAGGG*UGGG
- Length
- 9 nucleotides
- Bulged bases
- 9K0Z|1|A|G|645
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9K0Z_032 not in the Motif Atlas
- Geometric match to IL_5J7L_033
- Geometric discrepancy: 0.083
- The information below is about IL_5J7L_033
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
9K0Z|1|A|C|642
9K0Z|1|A|A|643
9K0Z|1|A|G|644
9K0Z|1|A|G|645
9K0Z|1|A|G|646
*
9K0Z|1|A|U|720
9K0Z|1|A|G|721
9K0Z|1|A|G|722
9K0Z|1|A|G|723
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain F
- Small ribosomal subunit protein bS6
- Chain O
- Small ribosomal subunit protein uS15
- Chain R
- Small ribosomal subunit protein bS18B
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