IL_9K0Z_035

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GGGAG*UC

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9K0Z_035 not in the Motif Atlas

Geometric match to IL_4LFB_032

Geometric discrepancy: 0.0902

The information below is about IL_4LFB_032

Detailed Annotation

Left turn

Broad Annotation

Left turn

Motif group

IL_29346.3

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

3

Unit IDs

9K0Z|1|A|G|754
9K0Z|1|A|G|755
9K0Z|1|A|G|756
9K0Z|1|A|A|757
9K0Z|1|A|G|758
*
9K0Z|1|A|U|784
9K0Z|1|A|C|785

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain K

Small ribosomal subunit protein uS11

Chain h

Large subunit ribosomal RNA; LSU rRNA

Chain i

Large ribosomal subunit protein uL2