IL_9K0Z_036
3D structure
- PDB id
- 9K0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EF-G2 bound 70S ribosome complex of M. smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CGAAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9K0Z_036 not in the Motif Atlas
- Geometric match to IL_8CRE_438
- Geometric discrepancy: 0.072
- The information below is about IL_8CRE_438
- Detailed Annotation
- tSH-tWH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.2
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
9K0Z|1|A|C|759
9K0Z|1|A|G|760
9K0Z|1|A|A|761
9K0Z|1|A|A|762
9K0Z|1|A|C|763
*
9K0Z|1|A|G|779
9K0Z|1|A|G|780
9K0Z|1|A|U|781
9K0Z|1|A|A|782
9K0Z|1|A|G|783
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain K
- Small ribosomal subunit protein uS11
- Chain h
- Large subunit ribosomal RNA; LSU rRNA
- Chain i
- Large ribosomal subunit protein uL2
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