IL_9K0Z_088
3D structure
- PDB id
- 9K0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EF-G2 bound 70S ribosome complex of M. smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- AGAG*UGAU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9K0Z_088 not in the Motif Atlas
- Geometric match to IL_8CRE_402
- Geometric discrepancy: 0.119
- The information below is about IL_8CRE_402
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.3
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 47
Unit IDs
9K0Z|1|h|A|623
9K0Z|1|h|G|624
9K0Z|1|h|A|625
9K0Z|1|h|G|626
*
9K0Z|1|h|U|646
9K0Z|1|h|G|647
9K0Z|1|h|A|648
9K0Z|1|h|U|649
Current chains
- Chain h
- 23S ribosomal RNA
Nearby chains
- Chain q
- Large ribosomal subunit protein uL13
- Chain x
- Large ribosomal subunit protein bL20
Coloring options: