IL_9K0Z_112
3D structure
- PDB id
- 9K0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EF-G2 bound 70S ribosome complex of M. smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 9K0Z|1|h|A|1275
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9K0Z_112 not in the Motif Atlas
- Geometric match to IL_4WF9_036
- Geometric discrepancy: 0.0776
- The information below is about IL_4WF9_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
9K0Z|1|h|C|1116
9K0Z|1|h|U|1117
9K0Z|1|h|A|1118
9K0Z|1|h|A|1119
9K0Z|1|h|G|1120
*
9K0Z|1|h|C|1272
9K0Z|1|h|G|1273
9K0Z|1|h|A|1274
9K0Z|1|h|A|1275
9K0Z|1|h|G|1276
Current chains
- Chain h
- 23S ribosomal RNA
Nearby chains
- Chain 3
- 50S ribosomal protein bL37
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain a
- Large ribosomal subunit protein uL30
- Chain x
- Large ribosomal subunit protein bL20
- Chain y
- Large ribosomal subunit protein bL21
Coloring options: