IL_9K0Z_134

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GUAG*UGAUC

Length

9 nucleotides

Bulged bases

9K0Z|1|h|U|1774

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9K0Z_134 not in the Motif Atlas

Geometric match to IL_9DFE_056

Geometric discrepancy: 0.1565

The information below is about IL_9DFE_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_74317.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

9K0Z|1|h|G|1658
9K0Z|1|h|U|1659
9K0Z|1|h|A|1660
9K0Z|1|h|G|1661
*
9K0Z|1|h|U|1771
9K0Z|1|h|G|1772
9K0Z|1|h|A|1773
9K0Z|1|h|U|1774
9K0Z|1|h|C|1775

Current chains

Chain h

23S ribosomal RNA

Nearby chains