IL_9K0Z_180

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

CG*CACG

Length

6 nucleotides

Bulged bases

9K0Z|1|h|A|2796, 9K0Z|1|h|C|2797

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9K0Z_180 not in the Motif Atlas

Geometric match to IL_4WF9_096

Geometric discrepancy: 0.1028

The information below is about IL_4WF9_096

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_44609.1

Basepair signature

cWW-cWW

Number of instances in this motif group

28

Unit IDs

9K0Z|1|h|C|2736
9K0Z|1|h|G|2737
*
9K0Z|1|h|C|2795
9K0Z|1|h|A|2796
9K0Z|1|h|C|2797
9K0Z|1|h|G|2798

Current chains

Chain h

23S ribosomal RNA

Nearby chains

Chain j

Large ribosomal subunit protein uL3

Chain q

Large ribosomal subunit protein uL13