IL_9K30_003

3D structure

PDB id

9K30 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the TbaIscB-omega RNA-target DNA complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

CAAACCC*GAAUAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K30|1|B|C|170
9K30|1|B|A|171
9K30|1|B|A|172
9K30|1|B|A|173
9K30|1|B|C|174
9K30|1|B|C|175
9K30|1|B|C|176
*
9K30|1|B|G|187
9K30|1|B|A|188
9K30|1|B|A|189
9K30|1|B|U|190
9K30|1|B|A|191
9K30|1|B|A|192
9K30|1|B|G|193

Current chains

Chain B

Omega RNA

Nearby chains

Chain A

TbaIscB