IL_9KDV_213
3D structure
- PDB id
- 9KDV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- AACUAGU*AACUUCUU
- Length
- 15 nucleotides
- Bulged bases
- 9KDV|1|S2|C|1404, 9KDV|1|S2|U|1405
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9KDV|1|S2|A|1402
9KDV|1|S2|A|1403
9KDV|1|S2|C|1404
9KDV|1|S2|U|1405
9KDV|1|S2|A|1406
9KDV|1|S2|G|1407
9KDV|1|S2|U|1408
*
9KDV|1|S2|A|1439
9KDV|1|S2|A|1440
9KDV|1|S2|C|1441
9KDV|1|S2|U|1442
9KDV|1|S2|U|1443
9KDV|1|S2|C|1444
9KDV|1|S2|U|1445
9KDV|1|S2|U|1446
Current chains
- Chain S2
- Mus musculus 18S ribosomal RNA
Nearby chains
- Chain SD
- Small ribosomal subunit protein uS3
- Chain SQ
- Small ribosomal subunit protein uS9
- Chain SU
- Small ribosomal subunit protein uS10
- Chain Sg
- Small ribosomal subunit protein RACK1
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