IL_9KDV_231

3D structure

PDB id

9KDV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.33 Å

Loop

Sequence

GAG*CUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9KDV_231 not in the Motif Atlas

Homologous match to IL_4WT8_349

Geometric discrepancy: 0.5008

The information below is about IL_4WT8_349

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9KDV|1|S7|G|6
9KDV|1|S7|A|7
9KDV|1|S7|G|8
*
9KDV|1|S7|C|66
9KDV|1|S7|U|67
9KDV|1|S7|C|68

Current chains

Chain S7

A*, P/E tRNA

Nearby chains