IL_9KMU_033

3D structure

PDB id

9KMU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bat SARSr-CoV RaTG15 Nsp1 bound to the Human 40S Ribosomal subunit-State2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.87 Å

Loop

Sequence

GUGCCAG*CGGUAAUUC

Length

16 nucleotides

Bulged bases

9KMU|1|2|A|628

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9KMU|1|2|G|611
9KMU|1|2|U|612
9KMU|1|2|G|613
9KMU|1|2|C|614
9KMU|1|2|C|615
9KMU|1|2|A|616
9KMU|1|2|G|617
*
9KMU|1|2|C|624
9KMU|1|2|G|625
9KMU|1|2|G|626
9KMU|1|2|U|627
9KMU|1|2|A|628
9KMU|1|2|A|629
9KMU|1|2|U|630
9KMU|1|2|U|631
9KMU|1|2|C|632

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain D

Small ribosomal subunit protein uS3

Chain X

Small ribosomal subunit protein uS12

Chain e

Small ribosomal subunit protein eS30

Chain n

ORF1ab polyprotein