IL_9KN0_053

3D structure

PDB id

9KN0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bat MERSr-CoV NL140422 Nsp1 bound to the Human 40S Ribosomal subunit-State2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CGAU*GCAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9KN0|1|2|C|1098
9KN0|1|2|G|1099
9KN0|1|2|A|1100
9KN0|1|2|U|1101
*
9KN0|1|2|G|1131
9KN0|1|2|C|1132
9KN0|1|2|A|1133
9KN0|1|2|G|1134

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain A

Small ribosomal subunit protein uS2

Chain B

Small ribosomal subunit protein eS1

Chain N

Small ribosomal subunit protein uS15

Chain R

Small ribosomal subunit protein eS17

Chain a

Small ribosomal subunit protein eS26