IL_9KN5_034
3D structure
- PDB id
- 9KN5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 40S ribosome complexed with HCV IRES, eIF1A and eIF3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUUC
- Length
- 16 nucleotides
- Bulged bases
- 9KN5|1|S2|A|628, 9KN5|1|S2|U|630, 9KN5|1|S2|U|631
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9KN5|1|S2|G|611
9KN5|1|S2|U|612
9KN5|1|S2|G|613
9KN5|1|S2|C|614
9KN5|1|S2|C|615
9KN5|1|S2|A|616
9KN5|1|S2|G|617
*
9KN5|1|S2|C|624
9KN5|1|S2|G|625
9KN5|1|S2|G|626||A
9KN5|1|S2|U|627
9KN5|1|S2|A|628
9KN5|1|S2|A|629
9KN5|1|S2|U|630
9KN5|1|S2|U|631
9KN5|1|S2|C|632
Current chains
- Chain S2
- Chains: S2
Nearby chains
- Chain 1A
- Eukaryotic translation initiation factor 1A, X-chromosomal
- Chain SD
- 40S ribosomal protein S3
- Chain SX
- 40S ribosomal protein S23
- Chain Se
- 40S ribosomal protein S30
Coloring options: