IL_9KZU_212
3D structure
- PDB id
- 9KZU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (non-rotated state) in complexed with eIF3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAGGUUC*GUUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9KZU|1|S2|G|1041
9KZU|1|S2|A|1042
9KZU|1|S2|G|1043
9KZU|1|S2|G|1044
9KZU|1|S2|U|1045
9KZU|1|S2|U|1046
9KZU|1|S2|C|1047
*
9KZU|1|S2|G|1071
9KZU|1|S2|U|1072
9KZU|1|S2|U|1073
9KZU|1|S2|C|1074
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain LA
- 60S ribosomal protein L8
- Chain Lp
- 60S ribosomal protein L37a
- Chain SN
- 40S ribosomal protein S13
- Chain SO
- 40S ribosomal protein S14
- Chain Sa
- 40S ribosomal protein S26
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