9KZU Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_9KZU_001 | 1/L5/37:44 | No text annotation | ||
| HL_9KZU_002 | 1/L5/68:73 | No text annotation | ||
| HL_9KZU_003 | 1/L5/89:95 | No text annotation | ||
| HL_9KZU_004 | 1/L5/131:137 | No text annotation | ||
| HL_9KZU_005 | 1/L5/204:211 | No text annotation | ||
| HL_9KZU_006 | 1/L5/222:226 | No text annotation | ||
| HL_9KZU_007 | 1/L5/230:238 | No text annotation | ||
| HL_9KZU_008 | 1/L5/289:298 | No text annotation | ||
| HL_9KZU_009 | 1/L5/314:323 | No text annotation | ||
| HL_9KZU_010 | 1/L5/368:373 | No text annotation | ||
| HL_9KZU_011 | 1/L5/393:398 | No text annotation | ||
| HL_9KZU_012 | 1/L5/1171:1190 | No text annotation | ||
| HL_9KZU_014 | 1/L5/1317:1326 | No text annotation | ||
| HL_9KZU_015 | 1/L5/1364:1373 | No text annotation | ||
| HL_9KZU_016 | 1/L5/1389:1394 | No text annotation | ||
| HL_9KZU_018 | 1/L5/1436:1448 | No text annotation | ||
| HL_9KZU_019 | 1/L5/1480:1484 | No text annotation | ||
| HL_9KZU_020 | 1/L5/1561:1566 | No text annotation | ||
| HL_9KZU_021 | 1/L5/1593:1602 | No text annotation | ||
| HL_9KZU_022 | 1/L5/1627:1635 | No text annotation | ||
| HL_9KZU_023 | 1/L5/1675:1680 | No text annotation | ||
| HL_9KZU_025 | 1/L5/1816:1823 | No text annotation | ||
| HL_9KZU_026 | 1/L5/1864:1870 | No text annotation | ||
| HL_9KZU_027 | 1/L5/1886:1893 | No text annotation | ||
| HL_9KZU_030 | 1/L5/2257:2261 | No text annotation | ||
| HL_9KZU_031 | 1/L5/2317:2322 | No text annotation | ||
| HL_9KZU_032 | 1/L5/2376:2384 | No text annotation | ||
| HL_9KZU_033 | 1/L5/2420:2426 | No text annotation | ||
| HL_9KZU_034 | 1/L5/2458:2463 | No text annotation | ||
| HL_9KZU_036 | 1/L5/2523:2532 | No text annotation | ||
| HL_9KZU_037 | 1/L5/2558:2569 | No text annotation | ||
| HL_9KZU_038 | 1/L5/2578:2583 | No text annotation | ||
| HL_9KZU_039 | 1/L5/2624:2632 | No text annotation | ||
| HL_9KZU_040 | 1/L5/2664:2670 | No text annotation | ||
| HL_9KZU_041 | 1/L5/2704:2712 | No text annotation | ||
| HL_9KZU_042 | 1/L5/2738:2742 | No text annotation | ||
| HL_9KZU_043 | 1/L5/2792:2799 | No text annotation | ||
| HL_9KZU_044 | 1/L5/2810:2816 | No text annotation | ||
| HL_9KZU_045 | 1/L5/2872:2877 | No text annotation | ||
| HL_9KZU_046 | 1/L5/3614:3618 | No text annotation | ||
| HL_9KZU_047 | 1/L5/3639:3649 | No text annotation | ||
| HL_9KZU_048 | 1/L5/3668:3674 | No text annotation | ||
| HL_9KZU_049 | 1/L5/3724:3729 | No text annotation | ||
| HL_9KZU_050 | 1/L5/3754:3769 | No text annotation | ||
| HL_9KZU_051 | 1/L5/3796:3804 | No text annotation | ||
| HL_9KZU_052 | 1/L5/3873:3882 | No text annotation | ||
| HL_9KZU_055 | 1/L5/4193:4201 | No text annotation | ||
| HL_9KZU_056 | 1/L5/4210:4222 | No text annotation | ||
| HL_9KZU_057 | 1/L5/4250:4258 | No text annotation | ||
| HL_9KZU_058 | 1/L5/4270:4277 | No text annotation | ||
| HL_9KZU_059 | 1/L5/4301:4309 | No text annotation | ||
| HL_9KZU_060 | 1/L5/4321:4326 | No text annotation | ||
| HL_9KZU_061 | 1/L5/4352:4362 | No text annotation | ||
| HL_9KZU_062 | 1/L5/4417:4425 | No text annotation | ||
| HL_9KZU_063 | 1/L5/4473:4482 | No text annotation | ||
| HL_9KZU_064 | 1/L5/4497:4503 | No text annotation | ||
| HL_9KZU_065 | 1/L5/4540:4545 | No text annotation | ||
| HL_9KZU_066 | 1/L5/4603:4608 | No text annotation | ||
| HL_9KZU_067 | 1/L5/4646:4651 | No text annotation | ||
| HL_9KZU_068 | 1/L5/4688:4702 | No text annotation | ||
| HL_9KZU_069 | 1/L5/4907:4914 | No text annotation | ||
| HL_9KZU_070 | 1/L5/4975:4983 | No text annotation | ||
| HL_9KZU_071 | 1/L5/5021:5028 | No text annotation | ||
| HL_9KZU_072 | 1/L7/32:45 | No text annotation | geometric HL_8QYX_071 HL_01182.1 | |
| HL_9KZU_073 | 1/L7/36:41 | No text annotation | homologous HL_7A0S_069 HL_59381.2 | |
| HL_9KZU_074 | 1/L7/86:91 | GNRA | homologous HL_4V9F_072 HL_34789.4 | |
| HL_9KZU_075 | 1/L8/47:56 | No text annotation | ||
| HL_9KZU_076 | 1/L8/68:90 | No text annotation | ||
| HL_9KZU_077 | 1/L8/107:112 | No text annotation | ||
| HL_9KZU_078 | 1/L8/121:129 | No text annotation | ||
| HL_9KZU_079 | 1/S2/7:17 | No text annotation | ||
| HL_9KZU_080 | 1/S2/69:80 | No text annotation | ||
| HL_9KZU_081 | 1/S2/156:162 | No text annotation | ||
| HL_9KZU_083 | 1/S2/288:295 | No text annotation | ||
| HL_9KZU_085 | 1/S2/377:387 | No text annotation | ||
| HL_9KZU_086 | 1/S2/416:421 | No text annotation | ||
| HL_9KZU_087 | 1/S2/441:452 | No text annotation | ||
| HL_9KZU_088 | 1/S2/461:468 | No text annotation | ||
| HL_9KZU_089 | 1/S2/495:508 | No text annotation | ||
| HL_9KZU_091 | 1/S2/566:584 | No text annotation | ||
| HL_9KZU_092 | 1/S2/618:623 | No text annotation | ||
| HL_9KZU_093 | 1/S2/820:828 | No text annotation | ||
| HL_9KZU_096 | 1/S2/957:966 | No text annotation | ||
| HL_9KZU_097 | 1/S2/994:999 | No text annotation | ||
| HL_9KZU_098 | 1/S2/1054:1064 | No text annotation | ||
| HL_9KZU_099 | 1/S2/1113:1120 | No text annotation | ||
| HL_9KZU_100 | 1/S2/1141:1146 | No text annotation | ||
| HL_9KZU_101 | 1/S2/1178:1183 | No text annotation | ||
| HL_9KZU_102 | 1/S2/1245:1254 | No text annotation | ||
| HL_9KZU_103 | 1/S2/1281:1316 | No text annotation | ||
| HL_9KZU_104 | 1/S2/1353:1358 | No text annotation | ||
| HL_9KZU_105 | 1/S2/1366:1373 | No text annotation | ||
| HL_9KZU_106 | 1/S2/1416:1424 | No text annotation | ||
| HL_9KZU_107 | 1/S2/1460:1466 | No text annotation | ||
| HL_9KZU_109 | 1/S2/1614:1625 | No text annotation | ||
| HL_9KZU_110 | 1/S2/1658:1666 | No text annotation | ||
| HL_9KZU_112 | 1/S2/1847:1852 | No text annotation | ||
| HL_9KZU_113 | 1/zy/12:22 | No text annotation | homologous HL_1F7U_001 HL_55043.2 | |
| HL_9KZU_114 | 1/zy/30:38 | tRNA anticodon loop | homologous HL_9MTS_102 HL_81376.3 | |
| HL_9KZU_115 | 1/zy/52:60 | T-loop with 2 stacked bulged bases | homologous HL_4YCO_003 HL_33597.3 | |
| HL_9KZU_116 | 1/zz/161:166 | No text annotation | ||
| HL_9KZU_118 | 1/zz/230:237 | No text annotation | ||
| HL_9KZU_119 | 1/zz/262:271 | No text annotation | ||
| HL_9KZU_120 | 1/zz/294:299 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_9KZU_013 | No text annotation | ||
| HL_9KZU_017 | No text annotation | ||
| HL_9KZU_024 | No text annotation | ||
| HL_9KZU_028 | No text annotation | ||
| HL_9KZU_029 | No text annotation | ||
| HL_9KZU_035 | No text annotation | ||
| HL_9KZU_053 | No text annotation | ||
| HL_9KZU_054 | No text annotation | ||
| HL_9KZU_082 | No text annotation | ||
| HL_9KZU_084 | No text annotation | ||
| HL_9KZU_090 | No text annotation | ||
| HL_9KZU_094 | No text annotation | ||
| HL_9KZU_095 | No text annotation | ||
| HL_9KZU_108 | No text annotation | ||
| HL_9KZU_111 | No text annotation | ||
| HL_9KZU_117 | No text annotation | ||
| HL_9KZU_121 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_9KZU_001 | 1/L5/6:7, 1/L8/149:151 | No text annotation | ||
| IL_9KZU_002 | 1/L5/12:14, 1/L8/143:144 | No text annotation | ||
| IL_9KZU_003 | 1/L5/16:18, 1/L8/139:141 | No text annotation | ||
| IL_9KZU_004 | 1/L5/26:27, 1/L5/55:57 | No text annotation | ||
| IL_9KZU_005 | 1/L5/30:37, 1/L5/44:52 | No text annotation | ||
| IL_9KZU_006 | 1/L5/81:88, 1/L5/96:102 | No text annotation | ||
| IL_9KZU_007 | 1/L5/118:122, 1/L5/147:153 | No text annotation | ||
| IL_9KZU_008 | 1/L5/125:126, 1/L5/142:144 | No text annotation | ||
| IL_9KZU_009 | 1/L5/169:173, 1/L5/263:266 | No text annotation | ||
| IL_9KZU_011 | 1/L5/182:189, 1/L5/252:255 | No text annotation | ||
| IL_9KZU_012 | 1/L5/195:196, 1/L5/244:246 | No text annotation | ||
| IL_9KZU_013 | 1/L5/199:201, 1/L5/214:215 | No text annotation | ||
| IL_9KZU_014 | 1/L5/339:342, 1/L8/32:33 | No text annotation | ||
| IL_9KZU_015 | 1/L5/348:350, 1/L8/25:26 | No text annotation | ||
| IL_9KZU_016 | 1/L5/387:390, 1/L5/401:414 | No text annotation | ||
| IL_9KZU_017 | 1/L5/415:421, 1/L8/13:19 | No text annotation | ||
| IL_9KZU_018 | 1/L5/443:446, 1/L5/1300:1304 | No text annotation | ||
| IL_9KZU_019 | 1/L5/448:450, 1/L5/1297:1298 | No text annotation | ||
| IL_9KZU_020 | 1/L5/459:460, 1/L5/695:697 | No text annotation | ||
| IL_9KZU_021 | 1/L5/462:464, 1/L5/691:693 | No text annotation | ||
| IL_9KZU_022 | 1/L5/466:472, 1/L5/682:689 | No text annotation | ||
| IL_9KZU_023 | 1/L5/482:485, 1/L5/671:672 | No text annotation | ||
| IL_9KZU_024 | 1/L5/487:488, 1/L5/665:669 | No text annotation | ||
| IL_9KZU_025 | 1/L5/491:499, 1/L5/655:662 | No text annotation | ||
| IL_9KZU_026 | 1/L5/499:505, 1/L5/653:655 | No text annotation | ||
| IL_9KZU_027 | 1/L5/508:510, 1/L5/649:650 | No text annotation | ||
| IL_9KZU_028 | 1/L5/512:516, 1/L5/645:647 | No text annotation | ||
| IL_9KZU_029 | 1/L5/709:710, 1/L5/1286:1288 | No text annotation | ||
| IL_9KZU_030 | 1/L5/723:724, 1/L5/942:945 | No text annotation | ||
| IL_9KZU_031 | 1/L5/727:731, 1/L5/938:939 | No text annotation | ||
| IL_9KZU_032 | 1/L5/732:735, 1/L5/928:937 | No text annotation | ||
| IL_9KZU_033 | 1/L5/737:740, 1/L5/925:926 | No text annotation | ||
| IL_9KZU_034 | 1/L5/740:742, 1/L5/922:925 | No text annotation | ||
| IL_9KZU_035 | 1/L5/745:752, 1/L5/911:919 | No text annotation | ||
| IL_9KZU_037 | 1/L5/1073:1074, 1/L5/1237:1239 | No text annotation | ||
| IL_9KZU_038 | 1/L5/1082:1084, 1/L5/1213:1217 | No text annotation | ||
| IL_9KZU_039 | 1/L5/1086:1087, 1/L5/1209:1211 | No text annotation | ||
| IL_9KZU_040 | 1/L5/1093:1094, 1/L5/1201:1203 | No text annotation | ||
| IL_9KZU_041 | 1/L5/1094:1096, 1/L5/1199:1201 | No text annotation | ||
| IL_9KZU_042 | 1/L5/1244:1245, 1/L5/1265:1267 | No text annotation | ||
| IL_9KZU_043 | 1/L5/1357:1360, 1/L5/1379:1382 | No text annotation | ||
| IL_9KZU_044 | 1/L5/1357:1361, 1/L5/1376:1382 | No text annotation | ||
| IL_9KZU_045 | 1/L5/1360:1361, 1/L5/1376:1379 | No text annotation | ||
| IL_9KZU_046 | 1/L5/1425:1429, 1/L5/1455:1460 | No text annotation | ||
| IL_9KZU_047 | 1/L5/1431:1434, 1/L5/1450:1453 | No text annotation | ||
| IL_9KZU_048 | 1/L5/1467:1468, 1/L5/1496:1498 | No text annotation | ||
| IL_9KZU_049 | 1/L5/1474:1476, 1/L5/1489:1490 | No text annotation | ||
| IL_9KZU_050 | 1/L5/1479:1480, 1/L5/1484:1486 | No text annotation | ||
| IL_9KZU_051 | 1/L5/1520:1522, 1/L5/1655:1657 | No text annotation | ||
| IL_9KZU_052 | 1/L5/1522:1526, 1/L5/1648:1655 | No text annotation | ||
| IL_9KZU_053 | 1/L5/1545:1546, 1/L5/1612:1614 | No text annotation | ||
| IL_9KZU_054 | 1/L5/1550:1551, 1/L5/1576:1578 | No text annotation | ||
| IL_9KZU_055 | 1/L5/1551:1555, 1/L5/1572:1576 | No text annotation | ||
| IL_9KZU_056 | 1/L5/1586:1589, 1/L5/1605:1607 | No text annotation | ||
| IL_9KZU_057 | 1/L5/1590:1592, 1/L5/1603:1604 | No text annotation | ||
| IL_9KZU_058 | 1/L5/1624:1626, 1/L5/1636:1640 | No text annotation | ||
| IL_9KZU_059 | 1/L5/1671:1673, 1/L5/1682:1684 | No text annotation | ||
| IL_9KZU_060 | 1/L5/1686:1688, 1/L5/1848:1851 | No text annotation | ||
| IL_9KZU_061 | 1/L5/1723:1725, 1/L5/1838:1839 | No text annotation | ||
| IL_9KZU_062 | 1/L5/1732:1737, 1/L5/1792:1797 | No text annotation | ||
| IL_9KZU_063 | 1/L5/1737:1738, 1/L5/1790:1792 | No text annotation | ||
| IL_9KZU_064 | 1/L5/1739:1744, 1/L5/1786:1789 | No text annotation | ||
| IL_9KZU_065 | 1/L5/1746:1749, 1/L5/1781:1784 | No text annotation | ||
| IL_9KZU_066 | 1/L5/1749:1751, 1/L5/1779:1781 | No text annotation | ||
| IL_9KZU_067 | 1/L5/1754:1761, 1/L5/1772:1776 | No text annotation | ||
| IL_9KZU_068 | 1/L5/1814:1816, 1/L5/1823:1824 | No text annotation | ||
| IL_9KZU_069 | 1/L5/1858:1860, 1/L5/1874:1876 | No text annotation | ||
| IL_9KZU_071 | 1/L5/1905:1909, 1/L5/2067:2071 | No text annotation | ||
| IL_9KZU_072 | 1/L5/1911:1918, 1/L5/2064:2065 | No text annotation | ||
| IL_9KZU_073 | 1/L5/1918:1920, 1/L5/2063:2064 | No text annotation | ||
| IL_9KZU_074 | 1/L5/1920:1922, 1/L5/2062:2063 | No text annotation | ||
| IL_9KZU_075 | 1/L5/1926:1933, 1/L5/2053:2058 | No text annotation | ||
| IL_9KZU_076 | 1/L5/1933:1944, 1/L5/2038:2053 | No text annotation | ||
| IL_9KZU_077 | 1/L5/1946:1948, 1/L5/2035:2036 | No text annotation | ||
| IL_9KZU_078 | 1/L5/1957:1965, 1/L5/2022:2026 | No text annotation | ||
| IL_9KZU_081 | 1/L5/2083:2085, 1/L5/2272:2273 | No text annotation | ||
| IL_9KZU_082 | 1/L5/2290:2292, 1/L5/2342:2345 | No text annotation | ||
| IL_9KZU_083 | 1/L5/2299:2301, 1/L5/2334:2335 | No text annotation | ||
| IL_9KZU_084 | 1/L5/2302:2309, 1/L5/2329:2333 | No text annotation | ||
| IL_9KZU_085 | 1/L5/2312:2314, 1/L5/2325:2326 | No text annotation | ||
| IL_9KZU_086 | 1/L5/2358:2364, 1/L5/3858:3863 | No text annotation | ||
| IL_9KZU_087 | 1/L5/2415:2419, 1/L5/2427:2429 | No text annotation | ||
| IL_9KZU_088 | 1/L5/2446:2450, 1/L5/2509:2514 | No text annotation | ||
| IL_9KZU_089 | 1/L5/2477:2479, 1/L5/2499:2500 | No text annotation | ||
| IL_9KZU_090 | 1/L5/2542:2547, 1/L5/2772:2774 | No text annotation | ||
| IL_9KZU_091 | 1/L5/2589:2593, 1/L5/2752:2756 | No text annotation | ||
| IL_9KZU_092 | 1/L5/2613:2614, 1/L5/2724:2726 | No text annotation | ||
| IL_9KZU_093 | 1/L5/2614:2615, 1/L5/2722:2724 | No text annotation | ||
| IL_9KZU_094 | 1/L5/2646:2648, 1/L5/2685:2688 | No text annotation | ||
| IL_9KZU_095 | 1/L5/2651:2653, 1/L5/2681:2682 | No text annotation | ||
| IL_9KZU_096 | 1/L5/2656:2662, 1/L5/2672:2678 | No text annotation | ||
| IL_9KZU_097 | 1/L5/2832:2838, 1/L5/3850:3853 | No text annotation | ||
| IL_9KZU_098 | 1/L5/2844:2846, 1/L5/3842:3844 | No text annotation | ||
| IL_9KZU_099 | 1/L5/2847:2850, 1/L5/3840:3841 | No text annotation | ||
| IL_9KZU_100 | 1/L5/2847:2855, 1/L5/3837:3841 | No text annotation | ||
| IL_9KZU_101 | 1/L5/2850:2855, 1/L5/3837:3840 | No text annotation | ||
| IL_9KZU_102 | 1/L5/2867:2872, 1/L5/2877:2883 | No text annotation | ||
| IL_9KZU_103 | 1/L5/2889:2891, 1/L5/3610:3612 | No text annotation | ||
| IL_9KZU_104 | 1/L5/2896:2897, 1/L5/3602:3605 | No text annotation | ||
| IL_9KZU_105 | 1/L5/2901:2905, 1/L5/3589:3598 | No text annotation | ||
| IL_9KZU_106 | 1/L5/3632:3633, 1/L5/3827:3829 | No text annotation | ||
| IL_9KZU_107 | 1/L5/3660:3665, 1/L5/3677:3684 | No text annotation | ||
| IL_9KZU_108 | 1/L5/3700:3703, 1/L5/3749:3750 | No text annotation | ||
| IL_9KZU_109 | 1/L5/3704:3705, 1/L5/3745:3748 | No text annotation | ||
| IL_9KZU_110 | 1/L5/3708:3714, 1/L5/3739:3742 | No text annotation | ||
| IL_9KZU_111 | 1/L5/3714:3721, 1/L5/3732:3739 | No text annotation | ||
| IL_9KZU_112 | 1/L5/3780:3781, 1/L5/3811:3814 | No text annotation | ||
| IL_9KZU_113 | 1/L5/3781:3792, 1/L5/3808:3811 | No text annotation | ||
| IL_9KZU_114 | 1/L5/3895:3898, 1/L5/4563:4565 | No text annotation | ||
| IL_9KZU_115 | 1/L5/3900:3902, 1/L5/4558:4561 | No text annotation | ||
| IL_9KZU_116 | 1/L5/3913:3915, 1/L5/4388:4389 | No text annotation | ||
| IL_9KZU_117 | 1/L5/3916:3917, 1/L5/4384:4387 | No text annotation | ||
| IL_9KZU_118 | 1/L5/3927:3929, 1/L5/4181:4184 | No text annotation | ||
| IL_9KZU_119 | 1/L5/4082:4088, 1/L5/4161:4164 | No text annotation | ||
| IL_9KZU_120 | 1/L5/4095:4097, 1/L5/4112:4113 | No text annotation | ||
| IL_9KZU_121 | 1/L5/4191:4192, 1/L5/4202:4204 | No text annotation | ||
| IL_9KZU_122 | 1/L5/4243:4245, 1/L5/4263:4267 | No text annotation | ||
| IL_9KZU_123 | 1/L5/4291:4293, 1/L5/4317:4318 | No text annotation | ||
| IL_9KZU_124 | 1/L5/4295:4298, 1/L5/4312:4315 | No text annotation | ||
| IL_9KZU_125 | 1/L5/4347:4350, 1/L5/4364:4365 | No text annotation | ||
| IL_9KZU_126 | 1/L5/4400:4403, 1/L5/4440:4444 | No text annotation | ||
| IL_9KZU_127 | 1/L5/4403:4405, 1/L5/4439:4440 | No text annotation | ||
| IL_9KZU_128 | 1/L5/4405:4407, 1/L5/4435:4439 | No text annotation | ||
| IL_9KZU_129 | 1/L5/4412:4416, 1/L5/4426:4430 | No text annotation | ||
| IL_9KZU_130 | 1/L5/4453:4454, 1/L5/4526:4528 | No text annotation | ||
| IL_9KZU_131 | 1/L5/4456:4458, 1/L5/4520:4524 | No text annotation | ||
| IL_9KZU_132 | 1/L5/4458:4459, 1/L5/4517:4520 | No text annotation | ||
| IL_9KZU_133 | 1/L5/4466:4468, 1/L5/4489:4491 | No text annotation | ||
| IL_9KZU_134 | 1/L5/4466:4470, 1/L5/4485:4491 | No text annotation | ||
| IL_9KZU_135 | 1/L5/4468:4470, 1/L5/4485:4489 | No text annotation | ||
| IL_9KZU_136 | 1/L5/4495:4497, 1/L5/4503:4505 | No text annotation | ||
| IL_9KZU_137 | 1/L5/4537:4538, 1/L5/4547:4549 | No text annotation | ||
| IL_9KZU_138 | 1/L5/4580:4582, 1/L5/4721:4723 | No text annotation | ||
| IL_9KZU_139 | 1/L5/4582:4585, 1/L5/4717:4721 | No text annotation | ||
| IL_9KZU_140 | 1/L5/4590:4592, 1/L5/4618:4620 | No text annotation | ||
| IL_9KZU_141 | 1/L5/4596:4603, 1/L5/4608:4614 | No text annotation | ||
| IL_9KZU_142 | 1/L5/4624:4629, 1/L5/4669:4673 | No text annotation | ||
| IL_9KZU_143 | 1/L5/4632:4637, 1/L5/4662:4666 | No text annotation | ||
| IL_9KZU_144 | 1/L5/4638:4640, 1/L5/4659:4661 | No text annotation | ||
| IL_9KZU_145 | 1/L5/4641:4642, 1/L5/4655:4658 | No text annotation | ||
| IL_9KZU_146 | 1/L5/4680:4685, 1/L5/4705:4710 | No text annotation | ||
| IL_9KZU_147 | 1/L5/4740:4742, 1/L5/4957:4959 | No text annotation | ||
| IL_9KZU_148 | 1/L5/4742:4746, 1/L5/4953:4957 | No text annotation | ||
| IL_9KZU_149 | 1/L5/4755:4765, 1/L5/4869:4878 | No text annotation | ||
| IL_9KZU_150 | 1/L5/4769:4776, 1/L5/4859:4865 | No text annotation | ||
| IL_9KZU_151 | 1/L5/4891:4896, 1/L5/4924:4929 | No text annotation | ||
| IL_9KZU_153 | 1/L5/4972:4975, 1/L5/4983:4986 | No text annotation | ||
| IL_9KZU_154 | 1/L5/4992:4994, 1/L5/5057:5059 | No text annotation | ||
| IL_9KZU_155 | 1/L5/4996:4997, 1/L5/5053:5055 | No text annotation | ||
| IL_9KZU_156 | 1/L5/5000:5002, 1/L5/5045:5050 | No text annotation | ||
| IL_9KZU_157 | 1/L5/5003:5009, 1/L5/5039:5044 | No text annotation | ||
| IL_9KZU_158 | 1/L5/5012:5017, 1/L5/5032:5036 | No text annotation | ||
| IL_9KZU_159 | 1/L7/15:16, 1/L7/62:64 | No text annotation | geometric IL_8QYX_165 IL_05642.2 | |
| IL_9KZU_160 | 1/L7/21:27, 1/L7/52:57 | No text annotation | geometric IL_8QYX_166 IL_41504.1 | |
| IL_9KZU_161 | 1/L7/28:31, 1/L7/46:51 | No text annotation | homologous IL_7A0S_104 IL_05192.7 | |
| IL_9KZU_162 | 1/L7/32:36, 1/L7/41:45 | Symmetric double minor groove platform | homologous IL_4V9F_104 IL_58103.12 | |
| IL_9KZU_163 | 1/L7/71:78, 1/L7/98:104 | No text annotation | geometric IL_8QYX_169 IL_62167.3 | |
| IL_9KZU_164 | 1/L7/79:81, 1/L7/95:97 | Isolated non-canonical cWW pair | homologous IL_7A0S_107 IL_71625.3 | |
| IL_9KZU_165 | 1/L7/82:85, 1/L7/92:94 | No text annotation | geometric IL_8QYX_171 IL_01003.3 | |
| IL_9KZU_166 | 1/L8/64:66, 1/L8/92:95 | No text annotation | ||
| IL_9KZU_167 | 1/S2/23:25, 1/S2/649:651 | No text annotation | ||
| IL_9KZU_168 | 1/S2/26:28, 1/S2/646:648 | No text annotation | ||
| IL_9KZU_169 | 1/S2/34:36, 1/S2/519:521 | No text annotation | ||
| IL_9KZU_170 | 1/S2/37:40, 1/S2/514:518 | No text annotation | ||
| IL_9KZU_171 | 1/S2/41:47, 1/S2/479:481 | No text annotation | ||
| IL_9KZU_172 | 1/S2/49:51, 1/S2/476:477 | No text annotation | ||
| IL_9KZU_173 | 1/S2/57:62, 1/S2/86:88 | No text annotation | ||
| IL_9KZU_174 | 1/S2/63:68, 1/S2/81:85 | No text annotation | ||
| IL_9KZU_175 | 1/S2/108:110, 1/S2/351:353 | No text annotation | ||
| IL_9KZU_176 | 1/S2/110:112, 1/S2/349:351 | No text annotation | ||
| IL_9KZU_177 | 1/S2/112:115, 1/S2/348:349 | No text annotation | ||
| IL_9KZU_178 | 1/S2/116:121, 1/S2/343:347 | No text annotation | ||
| IL_9KZU_179 | 1/S2/145:151, 1/S2/167:174 | No text annotation | ||
| IL_9KZU_180 | 1/S2/152:155, 1/S2/163:166 | No text annotation | ||
| IL_9KZU_181 | 1/S2/188:192, 1/S2/207:211 | No text annotation | ||
| IL_9KZU_182 | 1/S2/317:319, 1/S2/332:333 | No text annotation | ||
| IL_9KZU_183 | 1/S2/321:324, 1/S2/329:330 | No text annotation | ||
| IL_9KZU_184 | 1/S2/359:364, 1/S2/396:403 | No text annotation | ||
| IL_9KZU_185 | 1/S2/366:371, 1/S2/393:394 | No text annotation | ||
| IL_9KZU_186 | 1/S2/411:413, 1/S2/424:429 | No text annotation | ||
| IL_9KZU_187 | 1/S2/437:439, 1/S2/454:456 | No text annotation | ||
| IL_9KZU_188 | 1/S2/459:461, 1/S2/468:470 | No text annotation | ||
| IL_9KZU_189 | 1/S2/487:489, 1/S2/511:512 | No text annotation | ||
| IL_9KZU_190 | 1/S2/491:495, 1/S2/508:509 | No text annotation | ||
| IL_9KZU_191 | 1/S2/528:530, 1/S2/554:557 | No text annotation | ||
| IL_9KZU_193 | 1/S2/599:608, 1/S2/635:637 | No text annotation | ||
| IL_9KZU_194 | 1/S2/611:617, 1/S2/624:632 | No text annotation | ||
| IL_9KZU_195 | 1/S2/663:665, 1/S2/1162:1164 | No text annotation | ||
| IL_9KZU_196 | 1/S2/665:671, 1/S2/1161:1162 | No text annotation | ||
| IL_9KZU_197 | 1/S2/673:675, 1/S2/1030:1032 | No text annotation | ||
| IL_9KZU_198 | 1/S2/676:680, 1/S2/1025:1029 | No text annotation | ||
| IL_9KZU_199 | 1/S2/802:803, 1/S2/860:863 | No text annotation | ||
| IL_9KZU_200 | 1/S2/805:807, 1/S2/856:858 | No text annotation | ||
| IL_9KZU_201 | 1/S2/807:815, 1/S2/849:856 | No text annotation | ||
| IL_9KZU_202 | 1/S2/832:834, 1/S2/841:842 | No text annotation | ||
| IL_9KZU_203 | 1/S2/873:876, 1/S2/910:912 | No text annotation | ||
| IL_9KZU_204 | 1/S2/876:879, 1/S2/907:910 | No text annotation | ||
| IL_9KZU_205 | 1/S2/879:884, 1/S2/901:907 | No text annotation | ||
| IL_9KZU_206 | 1/S2/922:923, 1/S2/1019:1022 | No text annotation | ||
| IL_9KZU_207 | 1/S2/925:927, 1/S2/1014:1017 | No text annotation | ||
| IL_9KZU_208 | 1/S2/927:931, 1/S2/1010:1014 | No text annotation | ||
| IL_9KZU_209 | 1/S2/931:935, 1/S2/1007:1010 | No text annotation | ||
| IL_9KZU_210 | 1/S2/942:945, 1/S2/981:984 | No text annotation | ||
| IL_9KZU_211 | 1/S2/952:956, 1/S2/967:974 | No text annotation | ||
| IL_9KZU_212 | 1/S2/1041:1047, 1/S2/1071:1074 | No text annotation | ||
| IL_9KZU_213 | 1/S2/1047:1051, 1/S2/1067:1071 | No text annotation | ||
| IL_9KZU_214 | 1/S2/1091:1093, 1/S2/1152:1158 | No text annotation | ||
| IL_9KZU_215 | 1/S2/1098:1101, 1/S2/1131:1134 | No text annotation | ||
| IL_9KZU_216 | 1/S2/1101:1103, 1/S2/1129:1131 | No text annotation | ||
| IL_9KZU_217 | 1/S2/1108:1110, 1/S2/1123:1124 | No text annotation | ||
| IL_9KZU_218 | 1/S2/1168:1175, 1/S2/1186:1191 | No text annotation | ||
| IL_9KZU_219 | 1/S2/1203:1205, 1/S2/1693:1696 | No text annotation | ||
| IL_9KZU_220 | 1/S2/1206:1208, 1/S2/1691:1692 | No text annotation | ||
| IL_9KZU_221 | 1/S2/1214:1217, 1/S2/1681:1685 | No text annotation | ||
| IL_9KZU_222 | 1/S2/1230:1232, 1/S2/1526:1528 | No text annotation | ||
| IL_9KZU_223 | 1/S2/1235:1236, 1/S2/1521:1523 | No text annotation | ||
| IL_9KZU_225 | 1/S2/1325:1327, 1/S2/1502:1503 | No text annotation | ||
| IL_9KZU_226 | 1/S2/1329:1335, 1/S2/1492:1500 | No text annotation | ||
| IL_9KZU_227 | 1/S2/1337:1338, 1/S2/1488:1490 | No text annotation | ||
| IL_9KZU_228 | 1/S2/1347:1349, 1/S2/1380:1382 | No text annotation | ||
| IL_9KZU_229 | 1/S2/1363:1365, 1/S2/1374:1375 | No text annotation | ||
| IL_9KZU_230 | 1/S2/1395:1399, 1/S2/1447:1450 | No text annotation | ||
| IL_9KZU_231 | 1/S2/1402:1405, 1/S2/1441:1444 | No text annotation | ||
| IL_9KZU_232 | 1/S2/1408:1409, 1/S2/1432:1438 | No text annotation | ||
| IL_9KZU_234 | 1/S2/1453:1456, 1/S2/1470:1475 | No text annotation | ||
| IL_9KZU_236 | 1/S2/1541:1550, 1/S2/1582:1592 | No text annotation | ||
| IL_9KZU_237 | 1/S2/1550:1558, 1/S2/1577:1582 | No text annotation | ||
| IL_9KZU_238 | 1/S2/1560:1562, 1/S2/1573:1575 | No text annotation | ||
| IL_9KZU_239 | 1/S2/1604:1610, 1/S2/1629:1635 | No text annotation | ||
| IL_9KZU_240 | 1/S2/1700:1702, 1/S2/1833:1836 | No text annotation | ||
| IL_9KZU_241 | 1/S2/1702:1705, 1/S2/1829:1833 | No text annotation | ||
| IL_9KZU_242 | 1/S2/1706:1708, 1/S2/1826:1828 | No text annotation | ||
| IL_9KZU_243 | 1/S2/1708:1711, 1/S2/1822:1826 | No text annotation | ||
| IL_9KZU_244 | 1/S2/1714:1716, 1/S2/1817:1819 | No text annotation | ||
| IL_9KZU_245 | 1/S2/1717:1720, 1/S2/1813:1816 | No text annotation | ||
| IL_9KZU_246 | 1/S2/1720:1722, 1/S2/1812:1813 | No text annotation | ||
| IL_9KZU_247 | 1/S2/1729:1731, 1/S2/1803:1805 | No text annotation | ||
| IL_9KZU_248 | 1/S2/1733:1736, 1/S2/1798:1801 | No text annotation | ||
| IL_9KZU_249 | 1/S2/1739:1741, 1/S2/1793:1795 | No text annotation | ||
| IL_9KZU_250 | 1/S2/1742:1746, 1/S2/1788:1792 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_9KZU_010 | No text annotation | ||
| IL_9KZU_036 | No text annotation | ||
| IL_9KZU_070 | No text annotation | ||
| IL_9KZU_079 | No text annotation | ||
| IL_9KZU_080 | No text annotation | ||
| IL_9KZU_152 | No text annotation | ||
| IL_9KZU_192 | No text annotation | ||
| IL_9KZU_224 | No text annotation | ||
| IL_9KZU_233 | No text annotation | ||
| IL_9KZU_235 | No text annotation | ||
| IL_9KZU_251 | No text annotation | ||
| IL_9KZU_252 | No text annotation | ||
| IL_9KZU_253 | No text annotation | ||
| IL_9KZU_254 | No text annotation | ||
| IL_9KZU_255 | No text annotation | ||
| IL_9KZU_256 | No text annotation | ||
| IL_9KZU_257 | No text annotation | ||
| IL_9KZU_258 | No text annotation | ||
| IL_9KZU_259 | No text annotation | ||
| IL_9KZU_260 | No text annotation | ||
| IL_9KZU_261 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_9KZU_001 | 1/L5/112:116, 1/L5/155:160, 1/L5/275:278 | No text annotation | ||
| J3_9KZU_002 | 1/L5/196:199, 1/L5/215:228, 1/L5/240:244 | No text annotation | ||
| J3_9KZU_003 | 1/L5/351:367, 1/L5/374:379, 1/L8/21:24 | No text annotation | ||
| J3_9KZU_004 | 1/L5/380:387, 1/L5/414:415, 1/L8/19:20 | No text annotation | ||
| J3_9KZU_005 | 1/L5/380:390, 1/L5/401:415, 1/L8/19:20 | No text annotation | ||
| J3_9KZU_006 | 1/L5/451:455, 1/L5/701:705, 1/L5/1292:1296 | No text annotation | ||
| J3_9KZU_007 | 1/L5/712:713, 1/L5/955:976, 1/L5/1278:1284 | No text annotation | ||
| J3_9KZU_008 | 1/L5/1531:1537, 1/L5/1622:1624, 1/L5/1640:1643 | No text annotation | ||
| J3_9KZU_009 | 1/L5/1546:1548, 1/L5/1580:1584, 1/L5/1609:1612 | No text annotation | ||
| J3_9KZU_010 | 1/L5/1726:1727, 1/L5/1802:1806, 1/L5/1832:1837 | No text annotation | ||
| J3_9KZU_012 | 1/L5/2393:2399, 1/L5/2805:2807, 1/L5/2819:2822 | No text annotation | ||
| J3_9KZU_013 | 1/L5/2402:2405, 1/L5/2785:2791, 1/L5/2800:2802 | No text annotation | ||
| J3_9KZU_014 | 1/L5/2440:2445, 1/L5/2515:2519, 1/L5/2536:2537 | No text annotation | ||
| J3_9KZU_015 | 1/L5/2451:2456, 1/L5/2465:2476, 1/L5/2501:2508 | No text annotation | ||
| J3_9KZU_016 | 1/L5/2549:2555, 1/L5/2572:2575, 1/L5/2757:2770 | No text annotation | ||
| J3_9KZU_017 | 1/L5/2575:2576, 1/L5/2585:2589, 1/L5/2756:2757 | No text annotation | ||
| J3_9KZU_018 | 1/L5/2598:2602, 1/L5/2737:2738, 1/L5/2742:2747 | No text annotation | ||
| J3_9KZU_019 | 1/L5/3937:3939, 1/L5/4074:4078, 1/L5/4168:4173 | No text annotation | ||
| J3_9KZU_020 | 1/L5/4091:4094, 1/L5/4114:4129, 1/L5/4155:4158 | No text annotation | ||
| J3_9KZU_021 | 1/L5/4228:4230, 1/L5/4331:4342, 1/L5/4370:4375 | No text annotation | ||
| J3_9KZU_022 | 1/L5/4241:4243, 1/L5/4267:4269, 1/L5/4278:4283 | No text annotation | ||
| J3_9KZU_023 | 1/L5/4463:4466, 1/L5/4491:4493, 1/L5/4507:4513 | No text annotation | ||
| J3_9KZU_024 | 1/L5/4748:4754, 1/L5/4879:4890, 1/L5/4930:4951 | No text annotation | ||
| J3_9KZU_025 | 1/L5/4970:4972, 1/L5/4986:4991, 1/L5/5060:5063 | No text annotation | ||
| J3_9KZU_026 | 1/L7/9:14, 1/L7/65:66, 1/L7/109:110 | No text annotation | geometric J3_8OI5_025 J3_26985.1 | |
| J3_9KZU_027 | 1/L8/44:45, 1/L8/58:64, 1/L8/95:99 | No text annotation | ||
| J3_9KZU_028 | 1/S2/40:41, 1/S2/481:487, 1/S2/512:514 | No text annotation | ||
| J3_9KZU_029 | 1/S2/682:684, 1/S2/918:922, 1/S2/1022:1023 | No text annotation | ||
| J3_9KZU_030 | 1/S2/682:684, 1/S2/918:923, 1/S2/1019:1023 | No text annotation | ||
| J3_9KZU_031 | 1/S2/816:819, 1/S2/829:831, 1/S2/843:848 | No text annotation | ||
| J3_9KZU_032 | 1/S2/938:941, 1/S2/985:993, 1/S2/1000:1004 | No text annotation | ||
| J3_9KZU_033 | 1/S2/1094:1096, 1/S2/1136:1140, 1/S2/1147:1151 | No text annotation | ||
| J3_9KZU_034 | 1/S2/1218:1221, 1/S2/1645:1651, 1/S2/1673:1680 | No text annotation | ||
| J3_9KZU_035 | 1/S2/1225:1228, 1/S2/1530:1532, 1/S2/1638:1641 | No text annotation | ||
| J3_9KZU_036 | 1/S2/1237:1244, 1/S2/1255:1266, 1/S2/1516:1520 | No text annotation | ||
| J3_9KZU_037 | 1/S2/1272:1277, 1/S2/1320:1324, 1/S2/1504:1510 | No text annotation | ||
| J3_9KZU_038 | 1/S2/1340:1345, 1/S2/1384:1389, 1/S2/1481:1486 | No text annotation | ||
| J3_9KZU_039 | 1/S2/1350:1351, 1/S2/1360:1363, 1/S2/1375:1379 | No text annotation | ||
| J3_9KZU_040 | 1/S2/1391:1395, 1/S2/1450:1453, 1/S2/1475:1479 | No text annotation | ||
| J3_9KZU_041 | 1/S2/1391:1395, 1/S2/1450:1456, 1/S2/1470:1479 | No text annotation | ||
| J3_9KZU_042 | 1/S2/1532:1536, 1/S2/1597:1604, 1/S2/1635:1638 | No text annotation | ||
| J4_9KZU_001 | 1/L5/111:112, 1/L5/278:283, 1/L5/304:310, 1/L5/327:330 | No text annotation | ||
| J4_9KZU_002 | 1/L5/196:199, 1/L5/215:222, 1/L5/226:228, 1/L5/240:244 | No text annotation | ||
| J4_9KZU_003 | 1/L5/981:984, 1/L5/1070:1072, 1/L5/1240:1243, 1/L5/1268:1273 | No text annotation | ||
| J4_9KZU_004 | 1/L5/2365:2371, 1/L5/2389:2391, 1/L5/2824:2829, 1/L5/3856:3857 | No text annotation | ||
| J4_9KZU_005 | 1/L5/2406:2410, 1/L5/2434:2439, 1/L5/2538:2539, 1/L5/2777:2784 | No text annotation | ||
| J4_9KZU_006 | 1/L5/2618:2619, 1/L5/2637:2642, 1/L5/2692:2698, 1/L5/2718:2719 | No text annotation | ||
| J4_9KZU_007 | 1/L5/3634:3638, 1/L5/3650:3654, 1/L5/3690:3694, 1/L5/3821:3826 | No text annotation | ||
| J4_9KZU_008 | 1/L5/3696:3698, 1/L5/3752:3753, 1/L5/3770:3780, 1/L5/3814:3819 | No text annotation | ||
| J4_9KZU_009 | 1/L5/4231:4235, 1/L5/4289:4291, 1/L5/4318:4319, 1/L5/4328:4330 | No text annotation | ||
| J4_9KZU_010 | 1/L5/4231:4235, 1/L5/4289:4293, 1/L5/4317:4319, 1/L5/4328:4330 | No text annotation | ||
| J4_9KZU_011 | 1/L5/4587:4590, 1/L5/4620:4621, 1/L5/4676:4678, 1/L5/4712:4715 | No text annotation | ||
| J4_9KZU_012 | 1/S2/98:106, 1/S2/355:357, 1/S2/405:409, 1/S2/431:432 | No text annotation | ||
| J4_9KZU_013 | 1/S2/671:673, 1/S2/1032:1037, 1/S2/1078:1089, 1/S2/1160:1161 | No text annotation | ||
| J4_9KZU_014 | 1/zy/7:10, 1/zy/24:25, 1/zy/43:48, 1/zy/64:65 | tRNA junction | homologous J4_2D6F_002 J4_35610.2 | |
| J5_9KZU_001 | 1/L5/19:21, 1/L8/35:42, 1/L8/101:106, 1/L8/113:114, 1/L8/136:138 | No text annotation | ||
| J5_9KZU_002 | 1/L5/1335:1340, 1/L5/1516:1519, 1/L5/1658:1661, 1/L5/2288:2290, 1/L5/2345:2351 | No text annotation | ||
| J5_9KZU_003 | 1/L5/2855:2863, 1/L5/2887:2888, 1/L5/3613:3614, 1/L5/3618:3626, 1/L5/3835:3837 | No text annotation | ||
| J5_9KZU_004 | 1/L5/3903:3910, 1/L5/4392:4400, 1/L5/4444:4453, 1/L5/4528:4534, 1/L5/4552:4557 | No text annotation | ||
| J5_9KZU_005 | 1/L5/3920:3923, 1/L5/4188:4191, 1/L5/4204:4205, 1/L5/4227:4228, 1/L5/4375:4381 | No text annotation | ||
| J5_9KZU_006 | 1/S2/30:34, 1/S2/521:527, 1/S2/558:565, 1/S2/585:595, 1/S2/641:644 | No text annotation | ||
| J5_9KZU_007 | 1/S2/53:56, 1/S2/89:96, 1/S2/434:436, 1/S2/457:459, 1/S2/470:474 | No text annotation | ||
| J5_9KZU_008 | 1/S2/122:144, 1/S2/175:185, 1/S2/214:219, 1/S2/302:314, 1/S2/336:342 | No text annotation | ||
| J6_9KZU_001 | 1/L5/21:26, 1/L5/57:67, 1/L5/74:78, 1/L5/105:109, 1/L5/332:339, 1/L8/33:35 | No text annotation | ||
| J6_9KZU_002 | 1/L5/1352:1355, 1/L5/1384:1388, 1/L5/1395:1399, 1/L5/1418:1421, 1/L5/1464:1466, 1/L5/1499:1504 | No text annotation | ||
| J6_9KZU_003 | 1/L5/3920:3923, 1/L5/4188:4191, 1/L5/4204:4205, 1/L5/4227:4230, 1/L5/4331:4342, 1/L5/4370:4381 | No text annotation | ||
| J7_9KZU_001 | 1/L5/1666:1671, 1/L5/1684:1685, 1/L5/1852:1855, 1/L5/1879:1884, 1/L5/1895:1899, 1/L5/2077:2078, 1/L5/2278:2283 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_9KZU_011 | No text annotation | ||
| J3_9KZU_043 | No text annotation | ||
| J4_9KZU_015 | No text annotation | ||
| J4_9KZU_016 | No text annotation |
Coloring options: