IL_9L6Y_001

3D structure

PDB id

9L6Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the L7Ae derivative protein LS12 in complex with its co-evolved target CS2 RNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.12 Å

Loop

Sequence

CAGAG*CCAUGACG

Length

13 nucleotides

Bulged bases

9L6Y|1|B|U|24

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01488.3

Basepair signature

cWW-tSS-tSH-L-R-tHS-L-cWW

Number of instances in this motif group

10

Unit IDs

9L6Y|1|B|C|6
9L6Y|1|B|A|7
9L6Y|1|B|G|8
9L6Y|1|B|A|9
9L6Y|1|B|G|10
*
9L6Y|1|B|C|21
9L6Y|1|B|C|22
9L6Y|1|B|A|23
9L6Y|1|B|U|24
9L6Y|1|B|G|25
9L6Y|1|B|A|26
9L6Y|1|B|C|27
9L6Y|1|B|G|28

Current chains

Chain B

CS2 RNA

Nearby chains

Chain A

Large ribosomal subunit protein eL8

Chain C

Large ribosomal subunit protein eL8