IL_9L6Y_002
3D structure
- PDB id
- 9L6Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the L7Ae derivative protein LS12 in complex with its co-evolved target CS2 RNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.12 Å
Loop
- Sequence
- CAGAG*CCAUGACG
- Length
- 13 nucleotides
- Bulged bases
- 9L6Y|1|D|U|24
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9L6Y_002 not in the Motif Atlas
- Geometric match to IL_6UFM_001
- Geometric discrepancy: 0.2377
- The information below is about IL_6UFM_001
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_01488.3
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
9L6Y|1|D|C|6
9L6Y|1|D|A|7
9L6Y|1|D|G|8
9L6Y|1|D|A|9
9L6Y|1|D|G|10
*
9L6Y|1|D|C|21
9L6Y|1|D|C|22
9L6Y|1|D|A|23
9L6Y|1|D|U|24
9L6Y|1|D|G|25
9L6Y|1|D|A|26
9L6Y|1|D|C|27
9L6Y|1|D|G|28
Current chains
- Chain D
- CS2 RNA
Nearby chains
- Chain A
- Large ribosomal subunit protein eL8
- Chain C
- Large ribosomal subunit protein eL8
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