IL_9M0P_017
3D structure
- PDB id
- 9M0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of human 80S ribosome in complex with montanine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- GAAC*GAGUUCAAGAGGGC
- Length
- 18 nucleotides
- Bulged bases
- 9M0P|1|L5|G|409, 9M0P|1|L5|G|413
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9M0P_017 not in the Motif Atlas
- Geometric match to IL_4WF9_015
- Geometric discrepancy: 0.1246
- The information below is about IL_4WF9_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44923.4
- Basepair signature
- cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
- Number of instances in this motif group
- 11
Unit IDs
9M0P|1|L5|G|387
9M0P|1|L5|A|388
9M0P|1|L5|A|389
9M0P|1|L5|C|390
*
9M0P|1|L5|G|401
9M0P|1|L5|A|402
9M0P|1|L5|G|403
9M0P|1|L5|U|404
9M0P|1|L5|U|405
9M0P|1|L5|C|406
9M0P|1|L5|A|407
9M0P|1|L5|A|408
9M0P|1|L5|G|409
9M0P|1|L5|A|410
9M0P|1|L5|G|411
9M0P|1|L5|G|412
9M0P|1|L5|G|413
9M0P|1|L5|C|414
Current chains
- Chain L5
- 28S ribosomal RNA|HOMO SAPIENS
Nearby chains
- Chain L8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LP
- 60S ribosomal protein L17
- Chain LY
- 60S ribosomal protein L26
- Chain Ll
- 60S ribosomal protein L39
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