3D structure

PDB id
9M0P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of human 80S ribosome in complex with montanine
Experimental method
ELECTRON MICROSCOPY
Resolution
2.78 Å

Loop

Sequence
CUCAUCAG*CUGGAG
Length
14 nucleotides
Bulged bases
9M0P|1|L5|U|1930, 9M0P|1|L5|C|1931, 9M0P|1|L5|G|2055, 9M0P|1|L5|A|2057
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9M0P|1|L5|C|1926
9M0P|1|L5|U|1927
9M0P|1|L5|C|1928
9M0P|1|L5|A|1929
9M0P|1|L5|U|1930
9M0P|1|L5|C|1931
9M0P|1|L5|A|1932
9M0P|1|L5|G|1933
*
9M0P|1|L5|C|2053
9M0P|1|L5|U|2054
9M0P|1|L5|G|2055
9M0P|1|L5|G|2056
9M0P|1|L5|A|2057
9M0P|1|L5|G|2058

Current chains

Chain L5
28S ribosomal RNA|HOMO SAPIENS

Nearby chains

Chain LH
60S ribosomal protein L9
Chain LM
60S ribosomal protein L14
Chain LO
60S ribosomal protein L13a
Chain LS
60S ribosomal protein L18a
Chain Lm
Ubiquitin-60S ribosomal protein L40

Coloring options:

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