IL_9M0P_122

3D structure

PDB id

9M0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human 80S ribosome in complex with montanine

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CUC*GUGAG

Length

8 nucleotides

Bulged bases

9M0P|1|L5|G|4522, 9M0P|1|L5|A|4523

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9M0P_122 not in the Motif Atlas

Homologous match to IL_9PN5_103

Geometric discrepancy: 0.0637

The information below is about IL_9PN5_103

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_30722.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

22

Unit IDs

9M0P|1|L5|C|4456
9M0P|1|L5|U|4457
9M0P|1|L5|C|4458
*
9M0P|1|L5|G|4520
9M0P|1|L5|U|4521
9M0P|1|L5|G|4522
9M0P|1|L5|A|4523
9M0P|1|L5|G|4524

Current chains

Chain L5

28S ribosomal RNA|HOMO SAPIENS

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LV

60S ribosomal protein L23