IL_9M0P_185

3D structure

PDB id

9M0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human 80S ribosome in complex with montanine

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GUGCCAG*CGGUAAUUC

Length

16 nucleotides

Bulged bases

9M0P|1|S2|A|628, 9M0P|1|S2|U|630, 9M0P|1|S2|U|631

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9M0P|1|S2|G|611
9M0P|1|S2|U|612
9M0P|1|S2|G|613
9M0P|1|S2|C|614
9M0P|1|S2|C|615
9M0P|1|S2|A|616
9M0P|1|S2|G|617
*
9M0P|1|S2|C|624
9M0P|1|S2|G|625
9M0P|1|S2|G|626
9M0P|1|S2|U|627
9M0P|1|S2|A|628
9M0P|1|S2|A|629
9M0P|1|S2|U|630
9M0P|1|S2|U|631
9M0P|1|S2|C|632

Current chains

Chain S2

18S ribosomal RNA|HOMO SAPIENS

Nearby chains

Chain CA

Elongation factor 2

Chain SD

40S ribosomal protein S3

Chain SX

40S ribosomal protein S23

Chain Se

40S ribosomal protein S30