3D structure

PDB id
9M0P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of human 80S ribosome in complex with montanine
Experimental method
ELECTRON MICROSCOPY
Resolution
2.78 Å

Loop

Sequence
GAAAAAAUU*ACCGCAGC
Length
17 nucleotides
Bulged bases
9M0P|1|S2|G|852
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9M0P|1|S2|G|807
9M0P|1|S2|A|808
9M0P|1|S2|A|809
9M0P|1|S2|A|810
9M0P|1|S2|A|811
9M0P|1|S2|A|812
9M0P|1|S2|A|813
9M0P|1|S2|U|814
9M0P|1|S2|U|815
*
9M0P|1|S2|A|849
9M0P|1|S2|C|850
9M0P|1|S2|C|851
9M0P|1|S2|G|852
9M0P|1|S2|C|853
9M0P|1|S2|A|854
9M0P|1|S2|G|855
9M0P|1|S2|C|856

Current chains

Chain S2
18S ribosomal RNA|HOMO SAPIENS

Nearby chains

Chain SE
40S ribosomal protein S4, X isoform
Chain SJ
40S ribosomal protein S9
Chain SL
40S ribosomal protein S11
Chain SW
40S ribosomal protein S15a

Coloring options:

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