3D structure

PDB id
9M0P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of human 80S ribosome in complex with montanine
Experimental method
ELECTRON MICROSCOPY
Resolution
2.78 Å

Loop

Sequence
CGA*UCUUUGG
Length
10 nucleotides
Bulged bases
9M0P|1|S2|C|1153, 9M0P|1|S2|U|1155, 9M0P|1|S2|G|1157
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9M0P|1|S2|C|1091
9M0P|1|S2|G|1092
9M0P|1|S2|A|1093
*
9M0P|1|S2|U|1152
9M0P|1|S2|C|1153
9M0P|1|S2|U|1154
9M0P|1|S2|U|1155
9M0P|1|S2|U|1156
9M0P|1|S2|G|1157
9M0P|1|S2|G|1158

Current chains

Chain S2
18S ribosomal RNA|HOMO SAPIENS

Nearby chains

Chain SC
40S ribosomal protein S2
Chain SL
40S ribosomal protein S11
Chain SN
40S ribosomal protein S13
Chain SW
40S ribosomal protein S15a
Chain SX
40S ribosomal protein S23
Chain Sb
40S ribosomal protein S27

Coloring options:

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