Motif IL_82706.5 Version IL_82706.5 of this group appears in releases 4.14 to 4.14
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 1-7 | 4-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_9SUM_185 | 9SUM | 0.0755 | 3 | CA | SSU rRNA | U | 1065 | U | 1067 | U | 1069 | G | 1071 | * | C | 1004 | G | 1005 | A | 1006 | cWW | cWW |
| 2 | IL_9PN5_191 | 9PN5 | 0.0629 | 3 | B5 | SSU rRNA | U | 1095 | U | 1097 | U | 1099 | G | 1101 | * | C | 1034 | G | 1035 | A | 1036 | cWW | cWW |
| 3 | IL_9H3G_205 | 9H3G | 0.0000 | 3 | h1 | SSU rRNA | U | 1096 | U | 1098 | U | 1100 | G | 1102 | * | C | 1035 | G | 1036 | A | 1037 | cWW | cWW |
| 4 | IL_8GLP_243 | 8GLP | 0.0589 | 3 | S2 | SSU rRNA | U | 1152 | U | 1154 | U | 1156 | G | 1158 | * | C | 1091 | G | 1092 | A | 1093 | cWW | cWW |
| 5 | IL_8CRE_439 | 8CRE | 0.0721 | 3 | CM | SSU rRNA | U | 1080 | U | 1082 | U | 1084 | G | 1086 | * | C | 1019 | G | 1020 | A | 1021 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCUUUGG*CGA | 3 |
| UUUUUGG*CGA | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUUUG*G | 3 |
| UUUUG*G | 2 |
Release history
| Release | 4.14 |
|---|---|
| Date | 2026-09-09 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (5)
- Basepair signature
- cWW-L-R-L-cWW
- Heat map statistics
- Min 0.06 | Avg 0.06 | Max 0.10
Coloring options: