IL_9MEE_124
3D structure
- PDB id
- 9MEE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- GOLLD RNA nanocage (env-38)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AAAC*GAAU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9MEE_124 not in the Motif Atlas
- Geometric match to IL_4LFB_060
- Geometric discrepancy: 0.1308
- The information below is about IL_4LFB_060
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.4
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 45
Unit IDs
9MEE|1|G|A|609
9MEE|1|G|A|610
9MEE|1|G|A|611
9MEE|1|G|C|612
*
9MEE|1|G|G|624
9MEE|1|G|A|625
9MEE|1|G|A|626
9MEE|1|G|U|627
Current chains
- Chain G
- GOLLD RNA nanocage
Nearby chains
- Chain A
- Giant, ornate, lake- and Lactobacillales-derived (GOLLD) RNA
Coloring options: