IL_9MKK_020

3D structure

PDB id

9MKK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of arbekacin bound Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGGGGAGG*CGUUACCCG

Length

17 nucleotides

Bulged bases

9MKK|1|A|U|485

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MKK|1|A|C|443
9MKK|1|A|G|444
9MKK|1|A|G|445
9MKK|1|A|G|446
9MKK|1|A|G|447
9MKK|1|A|A|448
9MKK|1|A|G|449
9MKK|1|A|G|450
*
9MKK|1|A|C|483
9MKK|1|A|G|484
9MKK|1|A|U|485
9MKK|1|A|U|486
9MKK|1|A|A|487
9MKK|1|A|C|488
9MKK|1|A|C|489
9MKK|1|A|C|490
9MKK|1|A|G|491

Current chains

Chain A

16S rRNA

Nearby chains

Chain D

Small ribosomal subunit protein uS4

Chain P

Small ribosomal subunit protein bS16