IL_9MKK_040

3D structure

PDB id

9MKK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of arbekacin bound Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAAGUUU*GAAUGUGCCUUCGGGAAC

Length

25 nucleotides

Bulged bases

9MKK|1|A|U|1030, 9MKK|1|A|C|1031

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MKK|1|A|G|1003
9MKK|1|A|A|1004
9MKK|1|A|A|1005
9MKK|1|A|G|1006
9MKK|1|A|U|1007
9MKK|1|A|U|1008
9MKK|1|A|U|1009
*
9MKK|1|A|G|1020
9MKK|1|A|A|1021
9MKK|1|A|A|1022
9MKK|1|A|U|1023
9MKK|1|A|G|1024
9MKK|1|A|U|1025
9MKK|1|A|G|1026
9MKK|1|A|C|1027
9MKK|1|A|C|1028
9MKK|1|A|U|1029
9MKK|1|A|U|1030
9MKK|1|A|C|1031
9MKK|1|A|G|1032
9MKK|1|A|G|1033
9MKK|1|A|G|1034
9MKK|1|A|A|1035
9MKK|1|A|A|1036
9MKK|1|A|C|1037

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

Small ribosomal subunit protein uS14