IL_9MKK_045

3D structure

PDB id

9MKK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of arbekacin bound Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUGCCAGCGG*CGGGAACUC

Length

20 nucleotides

Bulged bases

9MKK|1|A|U|1126

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MKK|1|A|G|1124
9MKK|1|A|U|1125
9MKK|1|A|U|1126
9MKK|1|A|G|1127
9MKK|1|A|C|1128
9MKK|1|A|C|1129
9MKK|1|A|A|1130
9MKK|1|A|G|1131
9MKK|1|A|C|1132
9MKK|1|A|G|1133
9MKK|1|A|G|1134
*
9MKK|1|A|C|1141
9MKK|1|A|G|1142
9MKK|1|A|G|1143
9MKK|1|A|G|1144
9MKK|1|A|A|1145
9MKK|1|A|A|1146
9MKK|1|A|C|1147
9MKK|1|A|U|1148
9MKK|1|A|C|1149

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

Small ribosomal subunit protein uS9

Chain J

Small ribosomal subunit protein uS10