IL_9MKK_136

3D structure

PDB id

9MKK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of arbekacin bound Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUCA*UACGCGAG

Length

12 nucleotides

Bulged bases

9MKK|1|a|A|2572, 9MKK|1|a|C|2573, 9MKK|1|a|G|2576, 9MKK|1|a|A|2577

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MKK|1|a|C|2510
9MKK|1|a|U|2511
9MKK|1|a|C|2512
9MKK|1|a|A|2513
*
9MKK|1|a|U|2571
9MKK|1|a|A|2572
9MKK|1|a|C|2573
9MKK|1|a|G|2574
9MKK|1|a|C|2575
9MKK|1|a|G|2576
9MKK|1|a|A|2577
9MKK|1|a|G|2578

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

50S ribosomal protein L3

Chain i

Large ribosomal subunit protein uL13

Chain z

50S ribosomal protein L32