IL_9MM6_101

3D structure

PDB id

9MM6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

ROOLefa-octamer-wild type

Experimental method

ELECTRON MICROSCOPY

Resolution

2.94 Å

Loop

Sequence

AGAGAAA*UGUUUAACGAAAGAAGUCGGUACGAGUAGCUUAAU

Length

42 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MM6|1|Y|A|306
9MM6|1|Y|G|307
9MM6|1|Y|A|308
9MM6|1|Y|G|309
9MM6|1|Y|A|310
9MM6|1|Y|A|311
9MM6|1|Y|A|312
*
9MM6|1|Y|U|325
9MM6|1|Y|G|326
9MM6|1|Y|U|327
9MM6|1|Y|U|328
9MM6|1|Y|U|329
9MM6|1|Y|A|330
9MM6|1|Y|A|331
9MM6|1|Y|C|332
9MM6|1|Y|G|333
9MM6|1|Y|A|334
9MM6|1|Y|A|335
9MM6|1|Y|A|336
9MM6|1|Y|G|337
9MM6|1|Y|A|338
9MM6|1|Y|A|339
9MM6|1|Y|G|340
9MM6|1|Y|U|341
9MM6|1|Y|C|342
9MM6|1|Y|G|343
9MM6|1|Y|G|344
9MM6|1|Y|U|345
9MM6|1|Y|A|346
9MM6|1|Y|C|347
9MM6|1|Y|G|348
9MM6|1|Y|A|349
9MM6|1|Y|G|350
9MM6|1|Y|U|351
9MM6|1|Y|A|352
9MM6|1|Y|G|353
9MM6|1|Y|C|354
9MM6|1|Y|U|355
9MM6|1|Y|U|356
9MM6|1|Y|A|357
9MM6|1|Y|A|358
9MM6|1|Y|U|359

Current chains

Chain Y

RNA (526-MER)

Nearby chains

Chain c

ROOL RNA