RNA 3D Hub //

9MM6 Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_9MM6_0011/A/39:47No text annotation
HL_9MM6_0021/A/92:97No text annotation
HL_9MM6_0031/A/124:129No text annotation
HL_9MM6_0041/A/147:152No text annotation
HL_9MM6_0051/A/229:233No text annotation
HL_9MM6_0061/A/259:267No text annotation
HL_9MM6_0071/A/316:321No text annotation
HL_9MM6_0081/A/441:446No text annotation
HL_9MM6_0091/A/550:559No text annotation
HL_9MM6_0101/E/39:47No text annotation
HL_9MM6_0111/E/92:97No text annotation
HL_9MM6_0121/E/124:129No text annotation
HL_9MM6_0131/E/147:152No text annotation
HL_9MM6_0141/E/229:233No text annotation
HL_9MM6_0151/E/259:267No text annotation
HL_9MM6_0161/E/316:321No text annotation
HL_9MM6_0171/E/441:446No text annotation
HL_9MM6_0181/E/550:559No text annotation
HL_9MM6_0191/I/39:47No text annotation
HL_9MM6_0201/I/92:97No text annotation
HL_9MM6_0211/I/124:129No text annotation
HL_9MM6_0221/I/147:152No text annotation
HL_9MM6_0231/I/229:233No text annotation
HL_9MM6_0241/I/259:267No text annotation
HL_9MM6_0251/I/316:321No text annotation
HL_9MM6_0261/I/441:446No text annotation
HL_9MM6_0271/I/550:559No text annotation
HL_9MM6_0281/M/39:47No text annotation
HL_9MM6_0291/M/92:97No text annotation
HL_9MM6_0301/M/124:129No text annotation
HL_9MM6_0311/M/147:152No text annotation
HL_9MM6_0321/M/229:233No text annotation
HL_9MM6_0331/M/259:267No text annotation
HL_9MM6_0341/M/316:321No text annotation
HL_9MM6_0351/M/441:446No text annotation
HL_9MM6_0361/M/550:559No text annotation
HL_9MM6_0371/Q/39:47No text annotation
HL_9MM6_0381/Q/92:97No text annotation
HL_9MM6_0391/Q/124:129No text annotation
HL_9MM6_0401/Q/147:152No text annotation
HL_9MM6_0411/Q/229:233No text annotation
HL_9MM6_0421/Q/259:267No text annotation
HL_9MM6_0431/Q/316:321No text annotation
HL_9MM6_0441/Q/441:446No text annotation
HL_9MM6_0451/Q/550:559No text annotation
HL_9MM6_0461/U/39:47No text annotation
HL_9MM6_0471/U/92:97No text annotation
HL_9MM6_0481/U/124:129No text annotation
HL_9MM6_0491/U/147:152No text annotation
HL_9MM6_0501/U/229:233No text annotation
HL_9MM6_0511/U/259:267No text annotation
HL_9MM6_0521/U/316:321No text annotation
HL_9MM6_0531/U/441:446No text annotation
HL_9MM6_0541/U/550:559No text annotation
HL_9MM6_0551/Y/39:47No text annotation
HL_9MM6_0561/Y/92:97No text annotation
HL_9MM6_0571/Y/124:129No text annotation
HL_9MM6_0581/Y/147:152No text annotation
HL_9MM6_0591/Y/229:233No text annotation
HL_9MM6_0601/Y/259:267No text annotation
HL_9MM6_0611/Y/316:321No text annotation
HL_9MM6_0621/Y/441:446No text annotation
HL_9MM6_0631/Y/550:559No text annotation
HL_9MM6_0641/c/39:47No text annotation
HL_9MM6_0651/c/92:97No text annotation
HL_9MM6_0661/c/124:129No text annotation
HL_9MM6_0671/c/147:152No text annotation
HL_9MM6_0681/c/229:233No text annotation
HL_9MM6_0691/c/259:267No text annotation
HL_9MM6_0701/c/316:321No text annotation
HL_9MM6_0711/c/441:446No text annotation
HL_9MM6_0721/c/550:559No text annotation

Problematic loops

No problematic loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_9MM6_0011/A/29:36,
1/A/50:52		No text annotation
IL_9MM6_0021/A/63:71,
1/A/163:167		No text annotation
IL_9MM6_0031/A/71:73,
1/A/162:163		No text annotation
IL_9MM6_0041/A/85:87,
1/A/102:104		No text annotation
IL_9MM6_0051/A/114:118,
1/A/135:139		No text annotation
IL_9MM6_0061/A/175:180,
1/A/541:546		No text annotation
IL_9MM6_0071/A/184:188,
1/A/532:537		No text annotation
IL_9MM6_0081/A/192:195,
1/A/522:528		No text annotation
IL_9MM6_0091/A/247:252,
1/A/273:278		No text annotation
IL_9MM6_0101/A/253:256,
1/A/270:272		No text annotation
IL_9MM6_0111/A/306:312,
1/A/325:359		No text annotation
IL_9MM6_0121/A/436:437,
1/A/451:453		No text annotation
IL_9MM6_0131/A/440:441,
1/A/446:448		No text annotation
IL_9MM6_0141/A/459:468,
1/A/511:513		No text annotation
IL_9MM6_0151/A/474:476,
1/A/500:505		No text annotation
IL_9MM6_0161/E/29:36,
1/E/50:52		No text annotation
IL_9MM6_0171/E/63:71,
1/E/163:167		No text annotation
IL_9MM6_0181/E/71:73,
1/E/162:163		No text annotation
IL_9MM6_0191/E/85:87,
1/E/102:104		No text annotation
IL_9MM6_0201/E/114:118,
1/E/135:139		No text annotation
IL_9MM6_0211/E/175:180,
1/E/541:546		No text annotation
IL_9MM6_0221/E/184:188,
1/E/532:537		No text annotation
IL_9MM6_0231/E/192:195,
1/E/522:528		No text annotation
IL_9MM6_0241/E/247:252,
1/E/273:278		No text annotation
IL_9MM6_0251/E/253:256,
1/E/270:272		No text annotation
IL_9MM6_0261/E/306:312,
1/E/325:359		No text annotation
IL_9MM6_0271/E/436:437,
1/E/451:453		No text annotation
IL_9MM6_0281/E/440:441,
1/E/446:448		No text annotation
IL_9MM6_0291/E/459:468,
1/E/511:513		No text annotation
IL_9MM6_0301/E/474:476,
1/E/500:505		No text annotation
IL_9MM6_0311/I/29:36,
1/I/50:52		No text annotation
IL_9MM6_0321/I/63:71,
1/I/163:167		No text annotation
IL_9MM6_0331/I/71:73,
1/I/162:163		No text annotation
IL_9MM6_0341/I/85:87,
1/I/102:104		No text annotation
IL_9MM6_0351/I/114:118,
1/I/135:139		No text annotation
IL_9MM6_0361/I/175:180,
1/I/541:546		No text annotation
IL_9MM6_0371/I/184:188,
1/I/532:537		No text annotation
IL_9MM6_0381/I/192:195,
1/I/522:528		No text annotation
IL_9MM6_0391/I/247:252,
1/I/273:278		No text annotation
IL_9MM6_0401/I/253:256,
1/I/270:272		No text annotation
IL_9MM6_0411/I/306:312,
1/I/325:359		No text annotation
IL_9MM6_0421/I/436:437,
1/I/451:453		No text annotation
IL_9MM6_0431/I/440:441,
1/I/446:448		No text annotation
IL_9MM6_0441/I/459:468,
1/I/511:513		No text annotation
IL_9MM6_0451/I/474:476,
1/I/500:505		No text annotation
IL_9MM6_0461/M/29:36,
1/M/50:52		No text annotation
IL_9MM6_0471/M/63:71,
1/M/163:167		No text annotation
IL_9MM6_0481/M/71:73,
1/M/162:163		No text annotation
IL_9MM6_0491/M/85:87,
1/M/102:104		No text annotation
IL_9MM6_0501/M/114:118,
1/M/135:139		No text annotation
IL_9MM6_0511/M/175:180,
1/M/541:546		No text annotation
IL_9MM6_0521/M/184:188,
1/M/532:537		No text annotation
IL_9MM6_0531/M/192:195,
1/M/522:528		No text annotation
IL_9MM6_0541/M/247:252,
1/M/273:278		No text annotation
IL_9MM6_0551/M/253:256,
1/M/270:272		No text annotation
IL_9MM6_0561/M/306:312,
1/M/325:359		No text annotation
IL_9MM6_0571/M/436:437,
1/M/451:453		No text annotation
IL_9MM6_0581/M/440:441,
1/M/446:448		No text annotation
IL_9MM6_0591/M/459:468,
1/M/511:513		No text annotation
IL_9MM6_0601/M/474:476,
1/M/500:505		No text annotation
IL_9MM6_0611/Q/29:36,
1/Q/50:52		No text annotation
IL_9MM6_0621/Q/63:71,
1/Q/163:167		No text annotation
IL_9MM6_0631/Q/71:73,
1/Q/162:163		No text annotation
IL_9MM6_0641/Q/85:87,
1/Q/102:104		No text annotation
IL_9MM6_0651/Q/114:118,
1/Q/135:139		No text annotation
IL_9MM6_0661/Q/175:180,
1/Q/541:546		No text annotation
IL_9MM6_0671/Q/184:188,
1/Q/532:537		No text annotation
IL_9MM6_0681/Q/192:195,
1/Q/522:528		No text annotation
IL_9MM6_0691/Q/247:252,
1/Q/273:278		No text annotation
IL_9MM6_0701/Q/253:256,
1/Q/270:272		No text annotation
IL_9MM6_0711/Q/306:312,
1/Q/325:359		No text annotation
IL_9MM6_0721/Q/436:437,
1/Q/451:453		No text annotation
IL_9MM6_0731/Q/440:441,
1/Q/446:448		No text annotation
IL_9MM6_0741/Q/459:468,
1/Q/511:513		No text annotation
IL_9MM6_0751/Q/474:476,
1/Q/500:505		No text annotation
IL_9MM6_0761/U/29:36,
1/U/50:52		No text annotation
IL_9MM6_0771/U/63:71,
1/U/163:167		No text annotation
IL_9MM6_0781/U/71:73,
1/U/162:163		No text annotation
IL_9MM6_0791/U/85:87,
1/U/102:104		No text annotation
IL_9MM6_0801/U/114:118,
1/U/135:139		No text annotation
IL_9MM6_0811/U/175:180,
1/U/541:546		No text annotation
IL_9MM6_0821/U/184:188,
1/U/532:537		No text annotation
IL_9MM6_0831/U/192:195,
1/U/522:528		No text annotation
IL_9MM6_0841/U/247:252,
1/U/273:278		No text annotation
IL_9MM6_0851/U/253:256,
1/U/270:272		No text annotation
IL_9MM6_0861/U/306:312,
1/U/325:359		No text annotation
IL_9MM6_0871/U/436:437,
1/U/451:453		No text annotation
IL_9MM6_0881/U/440:441,
1/U/446:448		No text annotation
IL_9MM6_0891/U/459:468,
1/U/511:513		No text annotation
IL_9MM6_0901/U/474:476,
1/U/500:505		No text annotation
IL_9MM6_0911/Y/29:36,
1/Y/50:52		No text annotation
IL_9MM6_0921/Y/63:71,
1/Y/163:167		No text annotation
IL_9MM6_0931/Y/71:73,
1/Y/162:163		No text annotation
IL_9MM6_0941/Y/85:87,
1/Y/102:104		No text annotation
IL_9MM6_0951/Y/114:118,
1/Y/135:139		No text annotation
IL_9MM6_0961/Y/175:180,
1/Y/541:546		No text annotation
IL_9MM6_0971/Y/184:188,
1/Y/532:537		No text annotation
IL_9MM6_0981/Y/192:195,
1/Y/522:528		No text annotation
IL_9MM6_0991/Y/247:252,
1/Y/273:278		No text annotation
IL_9MM6_1001/Y/253:256,
1/Y/270:272		No text annotation
IL_9MM6_1011/Y/306:312,
1/Y/325:359		No text annotation
IL_9MM6_1021/Y/436:437,
1/Y/451:453		No text annotation
IL_9MM6_1031/Y/440:441,
1/Y/446:448		No text annotation
IL_9MM6_1041/Y/459:468,
1/Y/511:513		No text annotation
IL_9MM6_1051/Y/474:476,
1/Y/500:505		No text annotation
IL_9MM6_1061/c/29:36,
1/c/50:52		No text annotation
IL_9MM6_1071/c/63:71,
1/c/163:167		No text annotation
IL_9MM6_1081/c/71:73,
1/c/162:163		No text annotation
IL_9MM6_1091/c/85:87,
1/c/102:104		No text annotation
IL_9MM6_1101/c/114:118,
1/c/135:139		No text annotation
IL_9MM6_1111/c/175:180,
1/c/541:546		No text annotation
IL_9MM6_1121/c/184:188,
1/c/532:537		No text annotation
IL_9MM6_1131/c/192:195,
1/c/522:528		No text annotation
IL_9MM6_1141/c/247:252,
1/c/273:278		No text annotation
IL_9MM6_1151/c/253:256,
1/c/270:272		No text annotation
IL_9MM6_1161/c/306:312,
1/c/325:359		No text annotation
IL_9MM6_1171/c/436:437,
1/c/451:453		No text annotation
IL_9MM6_1181/c/440:441,
1/c/446:448		No text annotation
IL_9MM6_1191/c/459:468,
1/c/511:513		No text annotation
IL_9MM6_1201/c/474:476,
1/c/500:505		No text annotation

Problematic loops

No problematic loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_9MM6_0011/A/214:226,
1/A/236:242,
1/A/283:297		No text annotation
J3_9MM6_0021/E/214:226,
1/E/236:242,
1/E/283:297		No text annotation
J3_9MM6_0031/I/214:226,
1/I/236:242,
1/I/283:297		No text annotation
J3_9MM6_0041/M/214:226,
1/M/236:242,
1/M/283:297		No text annotation
J3_9MM6_0051/Q/214:226,
1/Q/236:242,
1/Q/283:297		No text annotation
J3_9MM6_0061/U/214:226,
1/U/236:242,
1/U/283:297		No text annotation
J3_9MM6_0071/Y/214:226,
1/Y/236:242,
1/Y/283:297		No text annotation
J3_9MM6_0081/c/214:226,
1/c/236:242,
1/c/283:297		No text annotation
J4_9MM6_0011/A/75:78,
1/A/111:113,
1/A/140:141,
1/A/158:160		No text annotation
J4_9MM6_0021/E/75:78,
1/E/111:113,
1/E/140:141,
1/E/158:160		No text annotation
J4_9MM6_0031/I/75:78,
1/I/111:113,
1/I/140:141,
1/I/158:160		No text annotation
J4_9MM6_0041/M/75:78,
1/M/111:113,
1/M/140:141,
1/M/158:160		No text annotation
J4_9MM6_0051/Q/75:78,
1/Q/111:113,
1/Q/140:141,
1/Q/158:160		No text annotation
J4_9MM6_0061/U/75:78,
1/U/111:113,
1/U/140:141,
1/U/158:160		No text annotation
J4_9MM6_0071/Y/75:78,
1/Y/111:113,
1/Y/140:141,
1/Y/158:160		No text annotation
J4_9MM6_0081/c/75:78,
1/c/111:113,
1/c/140:141,
1/c/158:160		No text annotation
J5_9MM6_0011/A/22:25,
1/A/56:57,
1/A/173:174,
1/A/547:549,
1/A/560:561		No text annotation
J5_9MM6_0021/E/22:25,
1/E/56:57,
1/E/173:174,
1/E/547:549,
1/E/560:561		No text annotation
J5_9MM6_0031/I/22:25,
1/I/56:57,
1/I/173:174,
1/I/547:549,
1/I/560:561		No text annotation
J5_9MM6_0041/M/22:25,
1/M/56:57,
1/M/173:174,
1/M/547:549,
1/M/560:561		No text annotation
J5_9MM6_0051/Q/22:25,
1/Q/56:57,
1/Q/173:174,
1/Q/547:549,
1/Q/560:561		No text annotation
J5_9MM6_0061/U/22:25,
1/U/56:57,
1/U/173:174,
1/U/547:549,
1/U/560:561		No text annotation
J5_9MM6_0071/Y/22:25,
1/Y/56:57,
1/Y/173:174,
1/Y/547:549,
1/Y/560:561		No text annotation
J5_9MM6_0081/c/22:25,
1/c/56:57,
1/c/173:174,
1/c/547:549,
1/c/560:561		No text annotation

Problematic loops

No problematic loops


Coloring options:
Copyright 2025 BGSU RNA group. Page generated in 0.045 s