IL_9MNC_073

3D structure

PDB id

9MNC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to small molecule SW393071

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CGCCCGAU*GG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MNC|1|L5|C|1911
9MNC|1|L5|G|1912
9MNC|1|L5|C|1913
9MNC|1|L5|C|1914
9MNC|1|L5|C|1915
9MNC|1|L5|G|1916
9MNC|1|L5|A|1917
9MNC|1|L5|U|1918
*
9MNC|1|L5|G|2064
9MNC|1|L5|G|2065

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LF

Large ribosomal subunit protein uL30

Chain LS

Large ribosomal subunit protein eL20

Chain LY

Large ribosomal subunit protein uL13

Chain Lf

Large ribosomal subunit protein eL33