IL_9MNC_079

3D structure

PDB id

9MNC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to small molecule SW393071

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

UAUAGACAG*CCGAA

Length

14 nucleotides

Bulged bases

9MNC|1|L5|A|1960

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MNC|1|L5|U|1957
9MNC|1|L5|A|1958
9MNC|1|L5|U|1959
9MNC|1|L5|A|1960
9MNC|1|L5|G|1961
9MNC|1|L5|A|1962
9MNC|1|L5|C|1963
9MNC|1|L5|A|1964
9MNC|1|L5|G|1965
*
9MNC|1|L5|C|2022
9MNC|1|L5|C|2023
9MNC|1|L5|G|2024
9MNC|1|L5|A|2025
9MNC|1|L5|A|2026

Current chains

Chain L5

28S rRNA

Nearby chains

Chain Lo

Large ribosomal subunit protein eL40