IL_9MR4_153

3D structure

PDB id

9MR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

NAC: Ribosome nascent chain complex(Oxa1L)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

UUCG*CCUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9MR4_153 not in the Motif Atlas

Homologous match to IL_9AXU_117

Geometric discrepancy: 0.149

The information below is about IL_9AXU_117

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71194.5

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

43

Unit IDs

9MR4|1|5|U|4972
9MR4|1|5|U|4973
9MR4|1|5|C|4974
9MR4|1|5|G|4975
*
9MR4|1|5|C|4983
9MR4|1|5|C|4984
9MR4|1|5|U|4985
9MR4|1|5|G|4986

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

Ribosomal protein L3

Chain P

Large ribosomal subunit protein uL22

Chain d

eL31