IL_9MR4_195

3D structure

PDB id

9MR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

NAC: Ribosome nascent chain complex(Oxa1L)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GAC*GGCC

Length

7 nucleotides

Bulged bases

9MR4|1|K|G|547

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9MR4_195 not in the Motif Atlas

Geometric match to IL_1RPU_001

Geometric discrepancy: 0.2744

The information below is about IL_1RPU_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.7

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

240

Unit IDs

9MR4|1|K|G|535
9MR4|1|K|A|536
9MR4|1|K|C|537
*
9MR4|1|K|G|546
9MR4|1|K|G|547
9MR4|1|K|C|548
9MR4|1|K|C|549

Current chains

Chain K

18S rRNA

Nearby chains

Chain AA

40S ribosomal protein S30