IL_9MR4_197

3D structure

PDB id

9MR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

NAC: Ribosome nascent chain complex(Oxa1L)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

UCCA*UUAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9MR4_197 not in the Motif Atlas

Geometric match to IL_8GLP_220

Geometric discrepancy: 0.1958

The information below is about IL_8GLP_220

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71194.5

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

43

Unit IDs

9MR4|1|K|U|566
9MR4|1|K|C|567
9MR4|1|K|C|568
9MR4|1|K|A|569
*
9MR4|1|K|U|581
9MR4|1|K|U|582
9MR4|1|K|A|583
9MR4|1|K|A|584

Current chains

Chain K

18S rRNA

Nearby chains

Chain DD

Ribosomal protein S9 (Predicted)

Chain NN

Small ribosomal subunit protein eS24