IL_9MR4_216
3D structure
- PDB id
- 9MR4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NAC: Ribosome nascent chain complex(Oxa1L)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- GUAU*AGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9MR4_216 not in the Motif Atlas
- Homologous match to IL_9PN5_186
- Geometric discrepancy: 0.1321
- The information below is about IL_9PN5_186
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.5
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 42
Unit IDs
9MR4|1|K|G|942
9MR4|1|K|U|943
9MR4|1|K|A|944
9MR4|1|K|U|945
*
9MR4|1|K|A|981
9MR4|1|K|G|982
9MR4|1|K|A|983
9MR4|1|K|C|984
Current chains
- Chain K
- 18S rRNA
Nearby chains
- Chain A
- Ribosomal protein L8
- Chain LL
- eS26
- Chain MM
- Small ribosomal subunit protein uS11
- Chain u
- 40S ribosomal protein S3a
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