IL_9MTQ_025

3D structure

PDB id

9MTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

CUGAC*GGUG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9MTQ_025 not in the Motif Atlas

Geometric match to IL_9DFE_025

Geometric discrepancy: 0.0614

The information below is about IL_9DFE_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

9MTQ|1|1A|C|846
9MTQ|1|1A|U|847
9MTQ|1|1A|G|848
9MTQ|1|1A|A|849
9MTQ|1|1A|C|850
*
9MTQ|1|1A|G|927
9MTQ|1|1A|G|928
9MTQ|1|1A|U|930
9MTQ|1|1A|G|931

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 13

50S ribosomal protein L30