IL_08938.1

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name for chain		1		2		3		4		5	break		6		7		8		9	1-9	2-8	3-7	4-7	5-6
1	IL_9DFE_025	9DFE	0.9039	0	Stack outside cWW	1A	LSU rRNA	C	846	U	847	G	848	A	849	C	850	*	G	927	G	928	U	930	G	931	cWW			tHS	cWW
2	IL_8P9A_291	8P9A	0.2860	2	UAA/GAN	AR	LSU rRNA	C	1532	U	1533	A	1534	A	1535	G	1536	*	C	1585	G	1586	A	1587	G	1590	cWW	tWH		tHS	cWW
3	IL_8OI5_064	8OI5	0.2527	2	UAA/GAN (H)	1	LSU rRNA	C	1528	U	1529	A	1530	A	1531	G	1532	*	C	1581	G	1582	A	1583	G	1586	cWW	tWH		tHS	cWW
4	IL_9AXU_060	9AXU	0.2622	2	UAA/GAN (H)	2	LSU rRNA	C	1566	U	1567	A	1568	A	1569	G	1570	*	C	1620	G	1621	A	1622	G	1625	cWW	tWH		tHS	cWW
5	IL_9E6Q_054	9E6Q	0.2581	2		1	LSU rRNA	C	1479	U	1480	A	1481	A	1482	G	1483	*	C	1506	G	1507	A	1508	G	1511	cWW	tWH		tHS	cWW
6	IL_8GLP_091	8GLP	0.2776	2	UAA/GAN (H)	L5	LSU rRNA	C	2446	U	2447	G	2448	A	2449	G	2450	*	C	2509	G	2510	A	2511	G	2514	cWW	tWH		tHS	cWW
7	IL_9DFE_051	9DFE	0.1810	1	UAA/GAN	1A	LSU rRNA	C	1351	U	1352	A	1353	A	1354	G	1355	*	C	1376	G	1377	A	1378	G	1380	cWW	tWH		tHS	cWW
8	IL_9DFE_054	9DFE	0.1800	1	UAA/GAN	1A	LSU rRNA	C	1577	U	1578	A	1579	A	1580	G	1581	*	C	1417	G	1418	A	1419	G	1421	cWW	tWH		tHS	cWW
9	IL_8B0X_114	8B0X	0.1540	1	UAA/GAN (H)	a	LSU rRNA	C	1579	U	1580	A	1581	A	1582	G	1583	*	C	1419	G	1420	A	1421	G	1423	cWW	tWH		tHS	cWW
10	IL_7A0S_033	7A0S	0.0000	1	UAA/GAN	X	LSU rRNA	C	1009	U	1010	A	1011	A	1012	G	1013	*	C	1164	G	1165	A	1166	G	1168	cWW	tWH		tHS	cWW
11	IL_8B0X_097	8B0X	0.0784	1	UAA/GAN (H)	a	LSU rRNA	C	1000	U	1001	A	1002	A	1003	G	1004	*	C	1155	G	1156	A	1157	G	1159	cWW	tWH		tHS	cWW
12	IL_4WF9_036	4WF9	0.0911	1	UAA/GAN	X	LSU rRNA	C	1042	U	1043	A	1044	A	1045	G	1046	*	C	1197	G	1198	A	1199	G	1201	cWW	tWH		tHS	cWW
13	IL_9DFE_035	9DFE	0.1020	1	UAA/GAN	1A	LSU rRNA	C	998	U	999	A	1000	A	1001	G	1002	*	C	1153	G	1154	A	1155	G	1157	cWW	tWH		tHS	cWW
14	IL_4V9F_037	4V9F	0.1127	1	UAA/GAN	0	LSU rRNA	U	1095	U	1096	A	1097	A	1098	G	1099	*	C	1257	G	1258	A	1259	A	1261	cWW	tWH		tHS	cWW
15	IL_9E6Q_042	9E6Q	0.1019	1	UAA/GAN (H)	1	LSU rRNA	U	1118	U	1119	A	1120	A	1121	G	1122	*	C	1279	G	1280	A	1281	A	1283	cWW	tWH		tHS	cWW
16	IL_8P9A_348	8P9A	0.1762	1	UAA/GAN	AR	LSU rRNA	A	3103	U	3104	U	3105	A	3106	U	3107	*	A	3127	G	3128	A	3129	U	3131	cWW	tWH		tHS	cWW
17	IL_8OI5_120	8OI5	0.1780	1	UAA/GAN (H)	1	LSU rRNA	A	3075	U	3076	U	3077	A	3078	U	3079	*	A	3099	G	3100	A	3101	U	3103	cWW	tWH		tHS	cWW
18	IL_9AXU_045	9AXU	0.1893	1	UAA/GAN (H)	2	LSU rRNA	U	1198	U	1199	A	1200	A	1201	G	1202	*	C	1359	C	1360	A	1361	A	1363	cWW	tWH	ntHW		cWW
19	IL_8GLP_075	8GLP	0.2120	1	UAA/GAN (H)	L5	LSU rRNA	U	1905	U	1906	A	1907	A	1908	G	1909	*	C	2067	C	2068	A	2069	A	2071	cWW	tWH	ntHW		cWW
20	IL_8P9A_276	8P9A	0.2130	1	UAA/GAN	AR	LSU rRNA	U	1167	U	1168	A	1169	A	1170	G	1171	*	C	1328	U	1329	A	1330	A	1332	cWW	tWH	ntHW		cWW
21	IL_8OI5_051	8OI5	0.1950	1	UAA/GAN (H)	1	LSU rRNA	U	1163	U	1164	A	1165	A	1166	A	1167	*	U	1324	U	1325	A	1326	A	1328	cWW	tWH	ntHW		cWW
22	IL_7A0S_051	7A0S	0.5069	1	UAA/GAN	X	LSU rRNA	C	1593	U	1594	A	1595	A	1596	A	1597	*	U	1431	G	1432	A	1433	G	1435		ntWH			cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
CUAAG*CGAAG	6
CUAAG*CGAAAG	4
UUAAG*CGAGA	2
AUUAU*AGAAU	2
UUAAG*CCAUA	2
CUGAC*GGUG	1
CUGAG*CGAAAG	1
CUAAG*CGAUG	1
UUAAG*CUAUA	1
UUAAA*UUAUA	1
CUAAA*UGAUG	1

Non-Watson-Crick part of the motif

Sequence	Counts
UAA*GAA	6
UAA*GAAA	4
UAA*GAU	2
UAA*GAG	2
UUA*GAA	2
UAA*CAU	2
UAA*UAU	2
UGA*GU	1
UGA*GAAA	1

Release history

Release	4.0	4.1	4.2	4.3	4.4	4.5	4.6
Date	2025-08-13	2025-09-10	2025-10-08	2025-11-05	2025-12-03	2025-12-31	2026-01-28
Status	New id, 1 parent	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Motif IL_08938.1 Version IL_08938.1 of this group appears in releases 4.0 to 4.6 Download Csv Json

3D structures

Complete motif including flanking bases

Non-Watson-Crick part of the motif

Release history

Parent motifs

Children motifs

Motif IL_08938.1 Version IL_08938.1 of this group appears in releases 4.0 to 4.6

Download

Csv

Json