IL_9MTQ_107
3D structure
- PDB id
- 9MTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.55 Å
Loop
- Sequence
- UGUAAG*UUGAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9MTQ_107 not in the Motif Atlas
- Geometric match to IL_9DFE_109
- Geometric discrepancy: 0.0532
- The information below is about IL_9DFE_109
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_48489.1
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
9MTQ|1|1A|U|2847
9MTQ|1|1A|G|2848
9MTQ|1|1A|U|2849
9MTQ|1|1A|A|2850
9MTQ|1|1A|A|2851
9MTQ|1|1A|G|2852
*
9MTQ|1|1A|U|2865
9MTQ|1|1A|U|2866
9MTQ|1|1A|G|2867
9MTQ|1|1A|A|2868
9MTQ|1|1A|G|2869
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1R
- 50S ribosomal protein L17
- Chain 1T
- 50S ribosomal protein L19
- Chain 1a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: