3D structure

PDB id
9MTQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.55 Å

Loop

Sequence
UAG*CGAAA
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_9MTQ_184 not in the Motif Atlas
Geometric match to IL_9DFE_011
Geometric discrepancy: 0.059
The information below is about IL_9DFE_011
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_76658.1
Basepair signature
cWW-L-R-cSH-cWW
Number of instances in this motif group
4

Unit IDs

9MTQ|1|2A|U|293
9MTQ|1|2A|A|294
9MTQ|1|2A|G|295
*
9MTQ|1|2A|C|343
9MTQ|1|2A|G|344
9MTQ|1|2A|A|345
9MTQ|1|2A|A|346
9MTQ|1|2A|A|347

Current chains

Chain 2A
23S Ribosomal RNA

Nearby chains

Chain 2Y
50S ribosomal protein L24

Coloring options:


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