IL_9MTS_028
3D structure
- PDB id
- 9MTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-unmodified Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.70A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- GCACU*AAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9MTS_028 not in the Motif Atlas
- Geometric match to IL_9DFE_028
- Geometric discrepancy: 0.0848
- The information below is about IL_9DFE_028
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_26222.2
- Basepair signature
- cWW-cWS-cSH-tWH-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
9MTS|1|1A|G|864
9MTS|1|1A|C|865
9MTS|1|1A|A|866
9MTS|1|1A|C|867
9MTS|1|1A|U|868
*
9MTS|1|1A|A|909
9MTS|1|1A|A|910
9MTS|1|1A|A|911
9MTS|1|1A|C|912
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1B
- 5S ribosomal RNA; 5S rRNA
- Chain 1Q
- 50S ribosomal protein L16
- Chain 1Z
- 50S ribosomal protein L25
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