IL_9MTS_190

3D structure

PDB id

9MTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-unmodified Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.70A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GAAAC*GAGAUAGC

Length

13 nucleotides

Bulged bases

9MTS|1|2A|G|801, 9MTS|1|2A|G|805

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9MTS_190 not in the Motif Atlas

Geometric match to IL_9DFE_016

Geometric discrepancy: 0.0645

The information below is about IL_9DFE_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_54041.2

Basepair signature

cWW-L-R-L-R-tWH-L-cWW

Number of instances in this motif group

7

Unit IDs

9MTS|1|2A|G|674
9MTS|1|2A|A|675
9MTS|1|2A|A|676
9MTS|1|2A|A|677
9MTS|1|2A|C|678
*
9MTS|1|2A|G|799
9MTS|1|2A|A|800
9MTS|1|2A|G|801
9MTS|1|2A|A|802
9MTS|1|2A|U|803
9MTS|1|2A|A|804
9MTS|1|2A|G|805
9MTS|1|2A|C|806

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2F

50S ribosomal protein L4

Chain 2P

50S ribosomal protein L15