3D structure

PDB id
9MTS (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-unmodified Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.70A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.7 Å

Loop

Sequence
CUAAG*CGAAG
Length
10 nucleotides
Bulged bases
9MTS|1|2A|A|1379
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_9MTS_222 not in the Motif Atlas
Geometric match to IL_9DFE_051
Geometric discrepancy: 0.0658
The information below is about IL_9DFE_051
Detailed Annotation
UAA/GAN
Broad Annotation
No text annotation
Motif group
IL_38507.2
Basepair signature
cWW-tWH-L-tHS-cWW
Number of instances in this motif group
16

Unit IDs

9MTS|1|2A|C|1351
9MTS|1|2A|U|1352
9MTS|1|2A|A|1353
9MTS|1|2A|A|1354
9MTS|1|2A|G|1355
*
9MTS|1|2A|C|1376
9MTS|1|2A|G|1377
9MTS|1|2A|A|1378
9MTS|1|2A|A|1379
9MTS|1|2A|G|1380

Current chains

Chain 2A
23S Ribosomal RNA

Nearby chains

Chain 27
50S ribosomal protein L34
Chain 2D
50S ribosomal protein L2

Coloring options:


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