IL_9MTS_227

3D structure

PDB id

9MTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-unmodified Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.70A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CUAG*CGAAG

Length

9 nucleotides

Bulged bases

9MTS|1|2A|A|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9MTS_227 not in the Motif Atlas

Geometric match to IL_9DFE_056

Geometric discrepancy: 0.0938

The information below is about IL_9DFE_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

9MTS|1|2A|C|1437
9MTS|1|2A|U|1438
9MTS|1|2A|A|1439
9MTS|1|2A|G|1440
*
9MTS|1|2A|C|1551
9MTS|1|2A|G|1552
9MTS|1|2A|A|1553
9MTS|1|2A|A|1554
9MTS|1|2A|G|1555

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains