IL_9MTT_165
3D structure
- PDB id
- 9MTT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site deacylated-tRNAcys at 2.60A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- C(5MC)G*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 9MTT|1|1a|5MC|1400, 9MTT|1|1a|A|1503
- QA status
- Modified nucleotides: 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9MTT_165 not in the Motif Atlas
- Geometric match to IL_8CRE_466
- Geometric discrepancy: 0.0869
- The information below is about IL_8CRE_466
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_18228.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
9MTT|1|1a|C|1399
9MTT|1|1a|5MC|1400
9MTT|1|1a|G|1401
*
9MTT|1|1a|C|1501
9MTT|1|1a|A|1502
9MTT|1|1a|A|1503
9MTT|1|1a|G|1504
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1v
- CYS-Stop mRNA
- Chain 1w
- Peptide chain release factor 1
- Chain 1x
- Transfer RNA; tRNA
Coloring options: