IL_9N2B_050
3D structure
- PDB id
- 9N2B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsB ribosome (BBB-70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GUUGC*GAACUC
- Length
- 11 nucleotides
- Bulged bases
- 9N2B|1|16|U|1126
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9N2B_050 not in the Motif Atlas
- Homologous match to IL_5J7L_051
- Geometric discrepancy: 0.1255
- The information below is about IL_5J7L_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_06691.1
- Basepair signature
- cWW-cWS-L-R-L-R-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
9N2B|1|16|G|1124
9N2B|1|16|U|1125
9N2B|1|16|U|1126
9N2B|1|16|G|1127
9N2B|1|16|C|1128
*
9N2B|1|16|G|1144
9N2B|1|16|A|1145
9N2B|1|16|A|1146
9N2B|1|16|C|1147
9N2B|1|16|U|1148
9N2B|1|16|C|1149
Current chains
- Chain 16
- 16S ribosomal RNA (rRNA) from the rrnB operon
Nearby chains
- Chain SI
- 30S ribosomal protein S9
- Chain SJ
- 30S ribosomal protein S10
Coloring options: