IL_9N2C_100
3D structure
- PDB id
- 9N2C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsH ribosome (HBB-70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 9N2C|1|23|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9N2C_100 not in the Motif Atlas
- Homologous match to IL_4WF9_036
- Geometric discrepancy: 0.0507
- The information below is about IL_4WF9_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
9N2C|1|23|C|998
9N2C|1|23|U|999
9N2C|1|23|A|1000
9N2C|1|23|A|1001
9N2C|1|23|G|1002
*
9N2C|1|23|C|1153
9N2C|1|23|G|1154
9N2C|1|23|A|1155
9N2C|1|23|A|1156
9N2C|1|23|G|1157
Current chains
- Chain 23
- 23S ribosomal RNA (rRNA) from the rrnB operon
Nearby chains
- Chain 5
- 5S ribosomal RNA; 5S rRNA
- Chain LT
- 50S ribosomal protein L20
- Chain LU
- 50S ribosomal protein L21
- Chain Ld
- Large ribosomal subunit protein uL30
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