IL_9N2C_176
3D structure
- PDB id
- 9N2C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsH ribosome (HBB-70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GGUCCC*GAAAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9N2C_176 not in the Motif Atlas
- Homologous match to IL_5J7L_356
- Geometric discrepancy: 0.0795
- The information below is about IL_5J7L_356
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_18472.4
- Basepair signature
- cWW-tSW-R-L-R-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
9N2C|1|5|G|23
9N2C|1|5|G|24
9N2C|1|5|U|25
9N2C|1|5|C|26
9N2C|1|5|C|27
9N2C|1|5|C|28
*
9N2C|1|5|G|56
9N2C|1|5|A|57
9N2C|1|5|A|58
9N2C|1|5|A|59
9N2C|1|5|C|60
Current chains
- Chain 5
- 5S large subunit ribosomal RNA of the H operon
Nearby chains
- Chain LE
- 50S ribosomal protein L5
- Chain LR
- 50S ribosomal protein L18
Coloring options: