IL_9N3I_006

3D structure

PDB id

9N3I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Vibrio cholerae Glycine Riboswitch - glycine bound at 2.9A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CAU*AG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9N3I_006 not in the Motif Atlas

Geometric match to IL_8B0X_086

Geometric discrepancy: 0.2164

The information below is about IL_8B0X_086

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15011.5

Basepair signature

cWW-L-cWW

Number of instances in this motif group

54

Unit IDs

9N3I|1|A|C|88
9N3I|1|A|A|89
9N3I|1|A|U|90
*
9N3I|1|A|A|120
9N3I|1|A|G|121

Current chains

Chain A

Glycine Riboswitch

Nearby chains